Gene RPD_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1925 
Symbol 
ID4022407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2162854 
End bp2163198 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content61% 
IMG OID637962118 
Producthypothetical protein 
Protein accessionYP_569061 
Protein GI91976402 
COG category[S] Function unknown 
COG ID[COG2361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.248108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.550673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTCCCC GCCTCGGAGA TCGACTGAAT CACATCGCGG CAGCGATCCA CGACATCCGC 
GATGCCCTGG CCAACCGCGA TTTCGCCGGT TTCCAGTCGG ATCCGCTGCG GCTTGCCGCG
ATCGAGCGTT TCCTGGAAAA GATCAGCGAA GCGTCGCGGC ATATTCCCGA CGATTTGAAG
GCGAGTGATC CATCGATCAA TTGGCGCAGG CTCGCCGACC TCGGTAACTG GCTTCGTCAC
GCGTACCACG CGACCGACGC CGGCTTGTTG TGGGACATGA TCCAGCGCGA TCTCGAGCCG
CTTCAGCAGT TCATCACGCG CGTGAGCAAG GAATCCGACC GTTGA
 
Protein sequence
MPPRLGDRLN HIAAAIHDIR DALANRDFAG FQSDPLRLAA IERFLEKISE ASRHIPDDLK 
ASDPSINWRR LADLGNWLRH AYHATDAGLL WDMIQRDLEP LQQFITRVSK ESDR