| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1915 |
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| Symbol | |
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| ID | 4022397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2152101 |
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| End bp | 2152670 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637962108 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | YP_569051 |
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| Protein GI | 91976392 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.35016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.588155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTACCA AGCAGGCGAC TGCGGACGAG GTTCTGATTA CCCGCATTGC CTGTGGCGAT
CGCGCGGCGA TGCAAGTCCT CTTTGGCAGG CATCATGTTC GGATTTTTCG CTTCGGGCTG
CGGCTGGTGC GGAACGAACA GGTCGCGGAA GACCTTGTCA GCGAGGTGTT CCTCGACGTG
TGGCGCCAAG CGGGAAAGTT CGAGGGTCGG TCTTCTGTTT CCACCTGGCT GCTGGCGATT
ACACGGTTCA AGGCGCTGTC TGCGCTGAGA CGCCGCAAAG ACGCCGAACT GGATGATGAG
GCCGCCGCTG CGATCGAGGA TCCGTCCGAT GGTCCGGAAC TGGCGGTACA GAAAAAGGAC
ACGAGCGATG TGTTGCGAAA GTGCCTCGAG GGACTTTCGC CCGACCATCG GGAAATCGTC
GATCTCGTCT ACTACCATGA GAAATCGGTG GAGGAGGTCG CAAATATCGT CGGAATTCCG
GAGAATACCG TGAAGACCCG ACTGTTCTAT GCGCGCAAGA AACTGGCCGA TCTGCTGCAG
GCAGCCGGCG TGCAGCGAGG CTGGCCATGA
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| Protein sequence | MITKQATADE VLITRIACGD RAAMQVLFGR HHVRIFRFGL RLVRNEQVAE DLVSEVFLDV
WRQAGKFEGR SSVSTWLLAI TRFKALSALR RRKDAELDDE AAAAIEDPSD GPELAVQKKD
TSDVLRKCLE GLSPDHREIV DLVYYHEKSV EEVANIVGIP ENTVKTRLFY ARKKLADLLQ
AAGVQRGWP
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