| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1914 |
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| Symbol | |
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| ID | 4022396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2150543 |
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| End bp | 2151688 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962107 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_569050 |
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| Protein GI | 91976391 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.743896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.638845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATCAA CTGCCGCGAT TTCAGGCATA CCAGCGAGCC AAGCGGACGG AGCCGAACAG
GCTCGGACGC TCGCGGTCCG TGCGCGCAGG ATGAAGCAGC GCCGCTACAT GTTTGATCTG
ATCGCGGCGA GCTACCTGGC CGACGCCGCG CTGCTGCAGA TCTACGTCTT CGCCGAGACG
ATTCCGCAGA TCGTGGTCCC CGCTTATATC GGCTGCGGCT TCGCCATCGT CGTCGCCAGC
ATCGCGTTGT CGGAAGTCGG TTTTCACGAT CGTTTCAAGG ACCACTATCT GGTCTTGCCG
ACCACCTTGC TCAATCTGGC GCTGGTGATG GGATTCAGCC TGTGGGCGCC GCAGGTCGCG
TTCCTGTTCA TCTGCTCGCT GTTCATCATC TTCAGCTTCG TCCCGCTGCG CGCGACCGCA
CGCCAAAGCG TGATGTGCTG GACTGCGATG ACCGGCATGC TGATGGTGCT GTTCATTTCC
ACCGATACGC CGTTGGCGAT GCCGCAGGGA TCGCTGCTGG AACGGCTCGG GACCATGCTG
GTGCTGGTCC TCACCGTCGG CCGCTGCATG TATATCGGGA TGTACTCCAG CGCGCTGCGG
GAGTCGCTCT ACAAGCGCGG CCTGCAGCTG CGCGAGGCGT ATCAGCGAAT CGAAGAGTTC
GCCGAGCTCG ACGAACTGAC CGGTTCGTAC AACCGGCGCT GCATCATGCG CATGCTCGAC
GACGAGATCG CCCGGGCCGA CCGCAGCGCG GCGCCGCTGT CGCTGGCGCT GATCGACCTC
GACTGGTTCA AACGGATCAA CGATAGCTTC GGCCATCCCA CCGGCGACGA GGTGCTGCGG
ACCTTCGCGA TCACCATCTT CGCCAACATC CGCAGCTTCG ACCGGTTCGG CCGCTACGGC
GGCGAGGAAT TCCTGCTGCT ACTGCCCAAT ACCTCGCGCG ATGAGGCCCA TAAGATGCTA
GACCGCCTGC GTGAGATCGT CGAGGAGCTC GACTGGACGG CATTCTCACC GGGGATGCGG
GTGACGCTGT CGGCCGGCGT CACAGCGATG GCGCCGAACG AAACCGCCGA AGCCGTGCTT
GCCCGCGCCG ACCGCGCGCT CTACGCCGCC AAGGAAGATG GACGAAACAA GATCGCGACA
ACCTGA
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| Protein sequence | MGSTAAISGI PASQADGAEQ ARTLAVRARR MKQRRYMFDL IAASYLADAA LLQIYVFAET
IPQIVVPAYI GCGFAIVVAS IALSEVGFHD RFKDHYLVLP TTLLNLALVM GFSLWAPQVA
FLFICSLFII FSFVPLRATA RQSVMCWTAM TGMLMVLFIS TDTPLAMPQG SLLERLGTML
VLVLTVGRCM YIGMYSSALR ESLYKRGLQL REAYQRIEEF AELDELTGSY NRRCIMRMLD
DEIARADRSA APLSLALIDL DWFKRINDSF GHPTGDEVLR TFAITIFANI RSFDRFGRYG
GEEFLLLLPN TSRDEAHKML DRLREIVEEL DWTAFSPGMR VTLSAGVTAM APNETAEAVL
ARADRALYAA KEDGRNKIAT T
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