| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1904 |
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| Symbol | |
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| ID | 4022386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2141372 |
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| End bp | 2142868 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637962097 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_569040 |
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| Protein GI | 91976381 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGC GGGTCAGGCC CGGGAATGAC GCCGAGGATG TGATAGTCGT CGCGCTCTGT
CGGATCATGC GAATTCCACA TGTCCAAGAA AGACTGCTGA TGCAAACTCC CCGCGAACTA
CTCGCCGAAC TGTGGGCCTC GGTCGGCGGC GATGGCGCTG CGCTCGATCG CGTGACGCTC
ACCGGTGAGG AGCCGCAACT GCCGTCGTCG TTTCGGGGCG ATGCCGCGGC GCAGGTGTCG
ATTGCCGCGA GCGGGCTTGC CGCGGCGGAG ATCTGGCGGA TGCGCAGCGG ACGCGCGCAA
ACCGTCAGCG TCGACACCCG CCACGCTGCG ATCGAGTGCC GCTCCGAGCG CTATCTACGC
CGTGACGGCG AACCGCCGCC GCCGATGTGG GACCCGATCG CCGGCGTCTA CCAGGTCAGC
GGAGGCCGCT ACGTCCGGCT ACACACCAAT TTTCCGCATC ATCGCGCGGC CGTTTGCGAG
GTGCTCGGCT GCAAGTCCGA GCGCGAGGCC GTGCAGGCCG CGTTGTTGAA TTGGGACGGC
GAGGCGTTCG AGACCGCCGC GTATCGAGCG GGTGGCGTCG TCGCGCTGAT GCGGTCGCGT
GAGGAGTGGC AGGCGCTGCC GCAGGCCTCC GCGCTCGACG CGCTACCGCT TGTGGAGATC
ACAAAGATCG GCGACGCCGC GCCAAAACCG TGGCCGGCCG GCGAGCGGCC GCTCGCTGGT
CTGCGCGTGC TCGACCTGTC GCGGGTGATC GCCGGGCCTG TCGCCGGCCG CACGCTCGCG
GCGCACGGCG CCGAGGTGAT GCTGGTGTCG AGCGAGAGAT TGCCGTCGAT TCCGTGGCTG
GTGATCGACA CCGGCCGCGG CAAGCTGTCG AGCTTCGCCG ATCTCACCAC GACGGAGGGG
CACGCCGCGC TGCGCGATCT GCTTACCGAC GCCGACATCT TCTCGCAGGG TTATCGCCCG
CAATCGCTGG CGGCGCTCGG CTTCTCGCCG GAGGAGGCGG CAACACTCAA TCCGGGTATC
GTCTATGTGT CGCTGTCCGC CTATGGCCGC GGCGGGCCGT GGGCGGCGCG GCGCGGCTTC
GACTCGCTGG TGCAATGCGC CACCGGCTTC AACCATGCCG AGGGGCAGGC GGCCGGCGTC
GCGGGGCCGA AGGAACTGCC GATGCAGGTC CTCGACCACG CCACCGGCTA TCTGATGGCG
TTCGGCGCGA TGATCGCCAA GGCGCGACAG GCGCGAGAGG GCGGTAGTTG GCATGTCCAG
GTCTCGCTCG CCCGCACCGG CAAATGGCTT TGGGAGATGG GACGGCTGGC AGAAGGGCTC
GCCGCTCCGG ACATTGTGCA AGTAGCCGCG GCCCCGTTTC TCGATCAGGC ATTGTCCAGT
TTCGGACAGC TGACAGCGGT GCGCCACGCG GCGATGCTGT CGGAGACGCG GGCGTATTGG
GCGCGGCCTG CCGTGCCGCT CGGCACCGAC CCGCCGCGTT GGCCGGCGCA GGGCTAG
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| Protein sequence | MGARVRPGND AEDVIVVALC RIMRIPHVQE RLLMQTPREL LAELWASVGG DGAALDRVTL
TGEEPQLPSS FRGDAAAQVS IAASGLAAAE IWRMRSGRAQ TVSVDTRHAA IECRSERYLR
RDGEPPPPMW DPIAGVYQVS GGRYVRLHTN FPHHRAAVCE VLGCKSEREA VQAALLNWDG
EAFETAAYRA GGVVALMRSR EEWQALPQAS ALDALPLVEI TKIGDAAPKP WPAGERPLAG
LRVLDLSRVI AGPVAGRTLA AHGAEVMLVS SERLPSIPWL VIDTGRGKLS SFADLTTTEG
HAALRDLLTD ADIFSQGYRP QSLAALGFSP EEAATLNPGI VYVSLSAYGR GGPWAARRGF
DSLVQCATGF NHAEGQAAGV AGPKELPMQV LDHATGYLMA FGAMIAKARQ AREGGSWHVQ
VSLARTGKWL WEMGRLAEGL AAPDIVQVAA APFLDQALSS FGQLTAVRHA AMLSETRAYW
ARPAVPLGTD PPRWPAQG
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