Gene RPD_1902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1902 
Symbol 
ID4022384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2136500 
End bp2137936 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content71% 
IMG OID637962095 
Producthypothetical protein 
Protein accessionYP_569038 
Protein GI91976379 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTCG CCTGCGATGC GTACGCGACG CAAGGCGGGC TGATGCCGGG GATGCCGCTG 
GCCACCGCAC GCGCGATGCA TCCGGCGCTG GAGGTGATCG ATCACGATCC CTTTGCCGAC
GCTGCGCTGC TTGCGGCGGT CGCCGACTGG TGCGACCGCT TCACTCCGCT GGTCGCGCTC
GACGGCGCGG ACGGGCTGTT ACTCGACATC ACCGGTTGCG CGCATCTGTT CGGCGACGAA
GCCGAACTGC TGGCGATGTT GTCGGCTGCG CTGATGCGGC AAGGTTTTGC AGTGAGCGCG
GCGATCGCAG GCACTGCGGT GGCGGCGCGG GCGCTGACCC GCGGTGCGCC GGGCAAGATT
GTCGCGCCGG GTGAGGAGGC GGGCGCGGTG GCGCCGCTGC CGGTGGCGGC GCTCGGCGTC
GATGAGGCGA TCGTGCGCGG CCTGCGCCGC GCCGGCCTGA CGACGATCGG CGACGCGCTC
GCGCGGCAGC CGTCCGAACT CGCCGCCCGC TTCGGCGAAG CCTTCGTCGC AGTGCTGCGC
CGCGCCAGCG GTGAAGACGA CGCGCCGATT TCGCCGCGCA AGCCGGCGCC GGACTACGTC
GTCGACAAGC GCTTCCCTGA GCCGGTCGCC ACGATCGAGG TGATCATGCC GACGCTGGTG
AAGCTGGCGC GGCTGTTGAT CGCCGCGATG GAACGGGGCG GCAAAGGCGC GCGGCAGCTC
ACGGCGTCGT TCTTCCGCAG CGACGGCGCG GTGCGGTGCA TCACAGTCGA GGCCGGGCAG
CCGGTGACAC GAGTCGAAGT GGTGGAGCGG CTGTTCGCCG AAAAGCTCGA CGCGCTGGCT
GATCCGCTCG ATCCCGGCTT CGGCTTCGAC CTGATCCGGC TCGCCGCCAG TCACAGCGTG
ACGATCACCG AGGCGCAGCG CGGTTTCGAC ACCACCGCGC ATCAGGCTGA AGATGTCGCC
GCGCTCGCCG ATACGCTGTC GGCGCGGCTC GGGGCGCGGC GGGTGATCCG GTATCTGCCG
CAAGACACCC ACATTCCCGA ACGCGCCGCG CTCGCGGTGC CGGTGCAGCA TTACCCGCCC
GATGGGGCCG ATGCGCCGTG GCCGGCGCGC ACCGATGAGC CGCCGCTGCG GCCGTTGCGA
TTGCTGCAGC AGCCGGAGCC GATCGAGGTG CTGGCCGGGG TTCCGGACGG TCCGCCGGCG
CAATTCATCT GGCGGCGGGT CACCCATCGG GTGGCGCGCG CCGAAGGTCC GGAGCGGATC
GCGATGGAAT GGTGGCGCGC CGCCTCGCCG GAGCTGACAC GCGATTACTT TCGCGTCGAG
GATGATGCAG GCTCACGATT CTGGCTGTTC CGGGATGGGC TCTACGGCCG CGAGATGATG
CCGCAGACGG ACGGCAGCGG TCATCCGCGC TGGTACATGC ACGGTCTGTT CGCGTGA
 
Protein sequence
MVVACDAYAT QGGLMPGMPL ATARAMHPAL EVIDHDPFAD AALLAAVADW CDRFTPLVAL 
DGADGLLLDI TGCAHLFGDE AELLAMLSAA LMRQGFAVSA AIAGTAVAAR ALTRGAPGKI
VAPGEEAGAV APLPVAALGV DEAIVRGLRR AGLTTIGDAL ARQPSELAAR FGEAFVAVLR
RASGEDDAPI SPRKPAPDYV VDKRFPEPVA TIEVIMPTLV KLARLLIAAM ERGGKGARQL
TASFFRSDGA VRCITVEAGQ PVTRVEVVER LFAEKLDALA DPLDPGFGFD LIRLAASHSV
TITEAQRGFD TTAHQAEDVA ALADTLSARL GARRVIRYLP QDTHIPERAA LAVPVQHYPP
DGADAPWPAR TDEPPLRPLR LLQQPEPIEV LAGVPDGPPA QFIWRRVTHR VARAEGPERI
AMEWWRAASP ELTRDYFRVE DDAGSRFWLF RDGLYGREMM PQTDGSGHPR WYMHGLFA