| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1900 |
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| Symbol | |
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| ID | 4022382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2134256 |
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| End bp | 2135494 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962093 |
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| Product | radical SAM family protein |
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| Protein accession | YP_569036 |
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| Protein GI | 91976377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.308107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTGC AGCGCAAGCT GGCCATTCTG GCGGATGCGG CGAAATACGA CGCCTCCTGC
GCCTCGAGCG GGACGGAGAA ACGCGACAGC CGCGACGGCA AGGGGCTGGG CTCGACCGCG
CCCGGCATGG GGATCTGCCA TTCCTATGCG CCGGACGGCC GCTGCATCTC ACTGTTGAAG
GTACTGCTCA CCAACGCCTG CAACTATGAC TGCCTGTATT GCGTCAACCG CGCTTCGTCG
AACGTGCCGC GCGCGCGCTT CACCGTCGAC GAGGTGGTGC AGCTCACGCT CGACTTCTAT
CGCCGCAACT ACATCGAGGG GCTGTTCCTG TCGTCGGGCA TCATCCGCAG CGCCGACTAC
ACCATGGAGC AGATCGTCGA GGTCGCGCGC CGCTTGCGGG AGGAGCACCA TTTCCGCGGC
TACATCCATC TCAAGACAAT CCCGGAGGCC GACGACGCGC TGATCAGCAA AGCCGGCCGC
TATGCCGATC GCCTCAGCAT CAATATTGAA GTGCCTGAGG AGCAAAGCCT CGCCGCGCTG
GCGCCGGAGA AGAACGTCCG CGCCATCCGC CGCACTATGG GGCGGCTGCG GCTGAAGCTC
GACGAGGCCA AGGAGGCGCG CACCGCGCCG AGCCGCGCCA AGCCGCCGCG CTTCGCCCCG
GCCGGCCAGA GCACACAGAT GATCGTCGGC GCCGACGCCG CCACCGACCA GACCATCCTC
GACACCAGCG CCAATCTCTA CGGTTCCTAC AATCTCAAGC GGGTGTACTA CTCGGCGTTC
AGCCCGATTC CGGATTCCAG CCGCGCCCTG CCGCTGCAGG CTCCGCCGCT GATCCGCGAG
CACCGGCTGT ATCAGGCCGA CTGGCTGATG CGGTTCTACG GCTTCGACGC CGGCGAAATC
ATTGACCCGT CCGCAGGTAT GCTGTCGCTG GAGATCGACC CGAAGCTCGC CTGGGCGCTG
CGGCATCGCG AGCGCTTCCC GCTCGACGTC AACCGCGCCA GCCGCGAGGA TCTGCTTCGG
GTTCCGGGCT TCGGCCGCAA AGCCGTCGAG CGCATCATCG CAACGCGGCG ACACAGCGCG
ATCCGCAGCA TGGATCTCGC GCGCCTGCAC ATCCCGCGGA ACAAGGCGCT GCCGTTCATC
GTTCTCTCCG ACCACCGCCC GACGCCGCAT CTCCTCGACA GCGCGCGGCT GGCGGAACGG
TTCCGGCCGA AGGCGCAGCA ACTTGGATTT GGATTCTAA
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| Protein sequence | MDVQRKLAIL ADAAKYDASC ASSGTEKRDS RDGKGLGSTA PGMGICHSYA PDGRCISLLK
VLLTNACNYD CLYCVNRASS NVPRARFTVD EVVQLTLDFY RRNYIEGLFL SSGIIRSADY
TMEQIVEVAR RLREEHHFRG YIHLKTIPEA DDALISKAGR YADRLSINIE VPEEQSLAAL
APEKNVRAIR RTMGRLRLKL DEAKEARTAP SRAKPPRFAP AGQSTQMIVG ADAATDQTIL
DTSANLYGSY NLKRVYYSAF SPIPDSSRAL PLQAPPLIRE HRLYQADWLM RFYGFDAGEI
IDPSAGMLSL EIDPKLAWAL RHRERFPLDV NRASREDLLR VPGFGRKAVE RIIATRRHSA
IRSMDLARLH IPRNKALPFI VLSDHRPTPH LLDSARLAER FRPKAQQLGF GF
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