Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1899 |
Symbol | |
ID | 4022381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2132717 |
End bp | 2134159 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637962092 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_569035 |
Protein GI | 91976376 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.530135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCCA TCCGGCTCGA CAGCGACACC GATTTCCATG GCTGGCGCAA GGCGGCGCGG GAGCTTGTGC TGGCGGAGGT CGCGCCGGCT GATATCAGTT GGACGGTGGC AGGCGACGAG CCCGAATTGT TCGATGCGCT AGCGCCGCCT GCGCCCTCCC CGAGTGCGCC GTCGTCCGGC ACCTTCAACG TTCCCGCTCG CTTCGTCGAG CTTGCGGCGA CCGCGATCCT GCATCGCGAT CCGCAGCGCT TCGCCTGGCT GTATCAAGCG CTGTGGCGGC TGCGCGCCAA CCCGGAGCTG TTGCAGATCG CGACCGATCC GGACGTTGCG CGGCTGCAGG CGATGGTGAA GGCGGTGCGC CGCGATGAGC ACAAAATGCA CGCCTTCGTC CGCTTTCGCG AGATCGGCCG CGAGCCAAAG TCGCGCTACG TCGCCTGGTT CGAGCCCGAG CACCATATCG TCGAGGCTGC GGCACCGTTC TTCGCCCGGC GCTTCGCCGA CATGGCGTGG TCGATCCTGA CGCCGGACGT CTGCGCGCAT TGGGACGGAC ACGCCATTGC GATCACGCCG GGCGTCGCCA AGGCGATGGC CCCATCCGAG GATCGATTGG AAGAAACCTG GCTGACCTAC TACGCCAGCA TCTTCAATCC AGCGCGGCTG AAGACCAAGG CGATGCAGGC GGAAATGCCG AAGAAATACT GGCGCAATCT ACCGGAAGCA GCATTGATCA AGCCGCTGAT CGAGCATGCC GAGCGCGCCG CGCACGCAAT GATCGCCGCG GAGGCGACCG CGCCGAAGAA ACCACAACGG CAGGAACAGC CGATGAGCCG AGCCGGACAC GAAGGCGATA GGCTCGAAAC CTTGCGCGAA CAGGCGCGCG ACTGCCGCGC CTGCGATCTG TGGAAGGACG CGACGCAGAC CGTGTTCGGC GAAGGTCCCC CGCATGCAAG CGTGATGCTG GTCGGCGAGC AGCCCGGCGA CAAGGAAGAC CTCGCCGGCC ACCCGTTCGT CGGCCCGGCC GGGCAGATGC TCGACCGCGC GCTGGCGGAA GCCGGGATCG ATCGCGCCGA GACCTACGTC ACCAACGCGG TGAAGCATTT CAAATTCGTG CCGCGCGGCA AGATCCGCCT GCACCAGAAG CCGGCGATGC CGGAAATCAA GGCGTGCCGG CCTTGGTACG AGCGCGAGCT CGCCGCGGTG CGCCCGCAGC TCGTGGTGGC GATGGGCGCG ACCGCGGCGC AGAGCGTGCT CGGCAGGATC ACACCGATCA ACAAGAACCG TGGCCATCTG ATCGATCGCG ACGGCGGCCC GCAGGTGCTG GTCACGGTGC ACCCATCCTA TCTGCTCCGG CTGCCCGACG ACGACGCAAA GGCCCGCGAA TACGCACGGT TCGTCGACGA CCTGAAGATC GCCGCCGCGC ATCTGAAGGC TGGGGCGGCC TAG
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Protein sequence | MHSIRLDSDT DFHGWRKAAR ELVLAEVAPA DISWTVAGDE PELFDALAPP APSPSAPSSG TFNVPARFVE LAATAILHRD PQRFAWLYQA LWRLRANPEL LQIATDPDVA RLQAMVKAVR RDEHKMHAFV RFREIGREPK SRYVAWFEPE HHIVEAAAPF FARRFADMAW SILTPDVCAH WDGHAIAITP GVAKAMAPSE DRLEETWLTY YASIFNPARL KTKAMQAEMP KKYWRNLPEA ALIKPLIEHA ERAAHAMIAA EATAPKKPQR QEQPMSRAGH EGDRLETLRE QARDCRACDL WKDATQTVFG EGPPHASVML VGEQPGDKED LAGHPFVGPA GQMLDRALAE AGIDRAETYV TNAVKHFKFV PRGKIRLHQK PAMPEIKACR PWYERELAAV RPQLVVAMGA TAAQSVLGRI TPINKNRGHL IDRDGGPQVL VTVHPSYLLR LPDDDAKARE YARFVDDLKI AAAHLKAGAA
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