| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1899 |
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| Symbol | |
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| ID | 4022381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2132717 |
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| End bp | 2134159 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962092 |
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| Product | phage SPO1 DNA polymerase-related protein |
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| Protein accession | YP_569035 |
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| Protein GI | 91976376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1573] Uracil-DNA glycosylase |
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| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.530135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCCA TCCGGCTCGA CAGCGACACC GATTTCCATG GCTGGCGCAA GGCGGCGCGG
GAGCTTGTGC TGGCGGAGGT CGCGCCGGCT GATATCAGTT GGACGGTGGC AGGCGACGAG
CCCGAATTGT TCGATGCGCT AGCGCCGCCT GCGCCCTCCC CGAGTGCGCC GTCGTCCGGC
ACCTTCAACG TTCCCGCTCG CTTCGTCGAG CTTGCGGCGA CCGCGATCCT GCATCGCGAT
CCGCAGCGCT TCGCCTGGCT GTATCAAGCG CTGTGGCGGC TGCGCGCCAA CCCGGAGCTG
TTGCAGATCG CGACCGATCC GGACGTTGCG CGGCTGCAGG CGATGGTGAA GGCGGTGCGC
CGCGATGAGC ACAAAATGCA CGCCTTCGTC CGCTTTCGCG AGATCGGCCG CGAGCCAAAG
TCGCGCTACG TCGCCTGGTT CGAGCCCGAG CACCATATCG TCGAGGCTGC GGCACCGTTC
TTCGCCCGGC GCTTCGCCGA CATGGCGTGG TCGATCCTGA CGCCGGACGT CTGCGCGCAT
TGGGACGGAC ACGCCATTGC GATCACGCCG GGCGTCGCCA AGGCGATGGC CCCATCCGAG
GATCGATTGG AAGAAACCTG GCTGACCTAC TACGCCAGCA TCTTCAATCC AGCGCGGCTG
AAGACCAAGG CGATGCAGGC GGAAATGCCG AAGAAATACT GGCGCAATCT ACCGGAAGCA
GCATTGATCA AGCCGCTGAT CGAGCATGCC GAGCGCGCCG CGCACGCAAT GATCGCCGCG
GAGGCGACCG CGCCGAAGAA ACCACAACGG CAGGAACAGC CGATGAGCCG AGCCGGACAC
GAAGGCGATA GGCTCGAAAC CTTGCGCGAA CAGGCGCGCG ACTGCCGCGC CTGCGATCTG
TGGAAGGACG CGACGCAGAC CGTGTTCGGC GAAGGTCCCC CGCATGCAAG CGTGATGCTG
GTCGGCGAGC AGCCCGGCGA CAAGGAAGAC CTCGCCGGCC ACCCGTTCGT CGGCCCGGCC
GGGCAGATGC TCGACCGCGC GCTGGCGGAA GCCGGGATCG ATCGCGCCGA GACCTACGTC
ACCAACGCGG TGAAGCATTT CAAATTCGTG CCGCGCGGCA AGATCCGCCT GCACCAGAAG
CCGGCGATGC CGGAAATCAA GGCGTGCCGG CCTTGGTACG AGCGCGAGCT CGCCGCGGTG
CGCCCGCAGC TCGTGGTGGC GATGGGCGCG ACCGCGGCGC AGAGCGTGCT CGGCAGGATC
ACACCGATCA ACAAGAACCG TGGCCATCTG ATCGATCGCG ACGGCGGCCC GCAGGTGCTG
GTCACGGTGC ACCCATCCTA TCTGCTCCGG CTGCCCGACG ACGACGCAAA GGCCCGCGAA
TACGCACGGT TCGTCGACGA CCTGAAGATC GCCGCCGCGC ATCTGAAGGC TGGGGCGGCC
TAG
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| Protein sequence | MHSIRLDSDT DFHGWRKAAR ELVLAEVAPA DISWTVAGDE PELFDALAPP APSPSAPSSG
TFNVPARFVE LAATAILHRD PQRFAWLYQA LWRLRANPEL LQIATDPDVA RLQAMVKAVR
RDEHKMHAFV RFREIGREPK SRYVAWFEPE HHIVEAAAPF FARRFADMAW SILTPDVCAH
WDGHAIAITP GVAKAMAPSE DRLEETWLTY YASIFNPARL KTKAMQAEMP KKYWRNLPEA
ALIKPLIEHA ERAAHAMIAA EATAPKKPQR QEQPMSRAGH EGDRLETLRE QARDCRACDL
WKDATQTVFG EGPPHASVML VGEQPGDKED LAGHPFVGPA GQMLDRALAE AGIDRAETYV
TNAVKHFKFV PRGKIRLHQK PAMPEIKACR PWYERELAAV RPQLVVAMGA TAAQSVLGRI
TPINKNRGHL IDRDGGPQVL VTVHPSYLLR LPDDDAKARE YARFVDDLKI AAAHLKAGAA
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