| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1898 |
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| Symbol | |
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| ID | 4022380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2131309 |
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| End bp | 2132544 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637962091 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_569034 |
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| Protein GI | 91976375 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.193262 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAC TCTCCCGATC AATCGCGACC CTGGCAACCG CTGCCCTTCT GTCCGCCGCT
GGCGGCCAAG CGATAGCGCA GAAAAAATAC GGCCCCGGCG CCAGCGACAC CGAAGTCAAG
ATCGGCAACA TCGTGCCCTA TAGCGGCCCG GCTTCGGCCT ATGGCAGCGT CGGCCGGGCA
CAAGAAGCCT ATTTCAAGAT GATCAACGAC AAGGGCGGCA TCAACGGCCG CAAGATCGTC
TACATCTCCT ACGACGACGC CTATTCGCCG CCGAAGTCGG TCGAGCAGAC CCGCAAGCTG
GTCGAGAGCG ACGAAGTGCT GTTCATGTTC AGCCCGCTCG GCACGCCGTC CAACACGGCG
ATCCAGAAAT ATCTCAACGT CAAGAAGGTG CCGCATTTGT TCCTGGCGTC GGGCGCCACC
AAATGGAACG ACCCGAAGCA CTTCCCGTGG ACGATGGGCT GGCTGCCGAG CTACCAGAGC
GAAGGCCGGA TCTACGCCAA ATATCTGCTG AAGGAAAAGC CGGGCGCGAA GATCGCTGTG
CTGTATCAGG GCGACGATTT CGGCAAGGAC TATCTCAAGG GCCTGAGGGA TGGTCTCGGC
GACAAGGCGT CCTCGATCGT GGTCGAAGAC AGCTACGAAC TGACCGAGCC GACCGTCGAT
TCCCACATCG TCAAGATCAA GGCAGCGGCG CCCGACGTGC TGGTGATCTT CGCCACGCCG
AAATTCGCCG CGCAGACCAT CAAGAAGGTC GCTGAACTTG CCTGGAAGCC GATGATGATC
GTGCCGAACG TCTCGGCCTC GACCGGCAGC GTGATGAAAC CCGCCGGCTT CGAGAATGCC
CAGGGCATCG TCTCCGCCTC CTACGCCAAG GACGCCACCG ACAAGCAGTG GGAAAACGAC
CCCGGCATGA AGGAATACTA CGACTTCCTG GCGAAGCACG CGCCGCAGGC CAGCCGCGCC
GATTCGTCGT TCACCACCGG CTACAACATC GCCGAAACCG TCGCGATCCT GATCAAGCAG
TGCGGCGACG ATCTCACCCG CGAGAACGTG ATGAAACAGG CCGCCAACCT GAAGGACATT
CAGCTCGGCG GGCTGCTGCC GGGCATCAAG CTCAACACCA GCGCAACCGA TTTCTCACCG
ATCGAACAGC TGCAACTGAT GCGGTTCGAG GGCGAGAACT GGAAGCTGTT CGGCGACGTG
ATCGAAGGCG AAGTCGCCGC ACCGACCGGC GGCTAG
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| Protein sequence | MSALSRSIAT LATAALLSAA GGQAIAQKKY GPGASDTEVK IGNIVPYSGP ASAYGSVGRA
QEAYFKMIND KGGINGRKIV YISYDDAYSP PKSVEQTRKL VESDEVLFMF SPLGTPSNTA
IQKYLNVKKV PHLFLASGAT KWNDPKHFPW TMGWLPSYQS EGRIYAKYLL KEKPGAKIAV
LYQGDDFGKD YLKGLRDGLG DKASSIVVED SYELTEPTVD SHIVKIKAAA PDVLVIFATP
KFAAQTIKKV AELAWKPMMI VPNVSASTGS VMKPAGFENA QGIVSASYAK DATDKQWEND
PGMKEYYDFL AKHAPQASRA DSSFTTGYNI AETVAILIKQ CGDDLTRENV MKQAANLKDI
QLGGLLPGIK LNTSATDFSP IEQLQLMRFE GENWKLFGDV IEGEVAAPTG G
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