Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1892 |
Symbol | |
ID | 4022374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2122973 |
End bp | 2124013 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962085 |
Product | inner-membrane translocator |
Protein accession | YP_569028 |
Protein GI | 91976369 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.322186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.768312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACACCA CCATCTTGCT GTTCCTGCTG CAGGACGGCA TCACCAACGG TGCGATCTAC GCGCTGCTCG GGCTGGCGTT GGTGCTGGTG TTCGCCGTGA CGCGGGTGAT CCTCATTCCG CAGGGCGAAT TTATCACTTT CGGCGCATTG ACCTATGCGA CGTTGTCCGC CGGAGGCGTT CCGGGCACCG CTCAGCTTGC GATGGTGATG GGCATTGTCG CCTTCTGCTT CGAACTGTTC AGGGTGCGAA AGTCGCTGTA CGCCGGCAAG GTGATGCGGA CCGCGCTGAT CTATCTGGTG TTTCCGGCAG TCGTGCTCGG TCTGGCGATG GTGCTGCCCG GCACCAGGCC CGGCGTCGCC GTCAACATCG CACTGTCGCT GGCGATCGTC GCCGCGATCG GGCTGTTTCT ATATCGCATC GCGTTTCAAC CGCTTGCGCA CACCTCGGTG CTGGTACTGC TGATCGCCTC CGTCGGCACC CATCTCGCCT TGCAGGGCTT CGGACTGGTG TTTTTCGGCG CTGAGGGCCT TCGCGGTCCG CCACTGTCCG ACGCTGCCGT CACGATCGGG CCGTTGCGCT TCACTGGCCA GAGCATCGCG GTCTACGCCA TCACCATCGC GCTGATGGCG GCGCTGTGGC TGTTCTTCGG CTACACCCGC ACCGGCAAGG CGCTGCGTGC CACCGCGGTC AACCGACTCG GTGCCCGCCT CGTCGGCATT CGCACCTCGC TGTCGGGCCA ACTCGCCTTC CTGCTCGCTT CGGTGATCGG CGCGATCTCC GGCATCCTGA TCGTCCCGAT CACAACGCTC TATTACGACA CCGGCTTCCT GATCGGCCTG AAGGGCTTCG TCGCCGCAAT TATCGGCGGC CTGGTCAGCT ATCCGCTCAC CGCGGTCGCG GCGATCGTGG TCGGCGTCGT CGAGGCTTTC TCATCGTTCT ACGCCTCGAA TTTCAAGGAG GTTATCGTCT TCACGCTGAT CCTGCCGGTG CTGGTGCTGC GCTCGCTCGC CGCCCCCGCG GTCGAAGAAG AGAAGGATTG A
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Protein sequence | MNTTILLFLL QDGITNGAIY ALLGLALVLV FAVTRVILIP QGEFITFGAL TYATLSAGGV PGTAQLAMVM GIVAFCFELF RVRKSLYAGK VMRTALIYLV FPAVVLGLAM VLPGTRPGVA VNIALSLAIV AAIGLFLYRI AFQPLAHTSV LVLLIASVGT HLALQGFGLV FFGAEGLRGP PLSDAAVTIG PLRFTGQSIA VYAITIALMA ALWLFFGYTR TGKALRATAV NRLGARLVGI RTSLSGQLAF LLASVIGAIS GILIVPITTL YYDTGFLIGL KGFVAAIIGG LVSYPLTAVA AIVVGVVEAF SSFYASNFKE VIVFTLILPV LVLRSLAAPA VEEEKD
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