| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1891 |
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| Symbol | |
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| ID | 4022373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2121198 |
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| End bp | 2122967 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962084 |
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| Product | ABC transporter related |
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| Protein accession | YP_569027 |
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| Protein GI | 91976368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.553447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.571968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAGGT GGCTTCCGAT CGCATTGTTC GCCGCGGTGA TGGCGGCGCT GCCGATGATC
CCCGGCATTC CGCCATTCTG GATCGTGCTG CTCGACAATA TCGGGCTCGC CGCGTTGGTG
GCGATGGGGC TCGTGCTGCT GACCGGCGTC GGCGGCCTCA CGTCTTTCGG TCAGGCCGCG
TTCTGCGGAT TCGGAGCCTA CACCACCGGC TATCTGACCA CGGTCTACGG CGTCTCGCCC
TGGCTGACAC TGCCGCTCTC GCTCCTCGTC GCCGGCGCCG CCGCGGTGCT GCTCGGGCTG
ATGACGGTCC GACTGTCGGG GCACTATCTG CCGCTCGGCA CGATCGCCTG GGGCATCTCG
CTGTATTATC TGTTCAGCAA GCTGGATTTC CTGGGCCGCA ACGACGGCAT TTCGCGTATT
CCACCGCTGT CGATCGGCAC GGTGCAGATG TTCGATCCAG AGACGATCTA CTTCGTGATC
TGGGCGATGG TACTGATCAG CGCACTGCTG ACGATGAACC TGCTCGACAG CCGCACCGGC
CGCGCCATCC GCGCGCTGCG CCGCGGCCAT ATCGCCGCGG AGGCGTTCGG CGTGCAGACC
GCGCGGGCGA AGCTGTTGGT CTTCATCTAC GCCGCGGTGC TGGCCGGCCT GTCCGGCTGG
CTGTATGCGC ACTTCCAGCG CAGCGTCAAT CCGACGCCGT TCGGGCCGCA GGCCGGCATC
GAGTATCTGT TCATCGCCGT GGTCGGCGGC GCCGGCTACG TCTGGGGCGG CGTGTTGGGC
GCGGCAATCG TCATTGTCCT GAAGGAAGTG CTGCAAGGCT ATCTGCCGAT GGTGTTCGGC
GGCCAGGGCC AGCTCGAGAT CATCGTTTTC GGCATTCTTC TGGTGGTGCT CCTGCAGCTC
GCGCCGGGCG GCGTCTGGCC GTGGCTGAGC AGCCTCATTC CGTTCAAGAT CCGCCGTCCG
CCCATCGATC CGGCTGCCGC GCTGGCGCCA CGCGAACGGA CGCTCGCGGA AACCGGCACG
CTGCTGAGGG TCGAACGCGC GCGAAAACAG TTCGGCGGCG TGATCGCTGT CAACGACGTC
TCGTTCGACG TCCACGCCCG TGAAATCGTC GCGTTGATCG GGCCGAACGG CGCCGGCAAG
TCGACAACCT TCAATCTGAT CACCGGCATC CTGACCACGA CCGGCGGCAC GATCGAACTG
CACGGCAGGC CGATCGACAA TACCCCGCCG CAGCAAGTGG TGAAGCTCGG CATCGCCCGC
ACTTTCCAGC ACGTCAAGCT GGTGCCGGAC ATGACAGTGC TCGAGAACGT CGCGATCGGC
GCGCATCTTC GCGGCCATTC CGGCGCGCTG AGCAGTATGC TGCGGTTCGA CCGCGCCGAC
GAGGCCAGGC TGCTCGCCGA AGCGACCCGC CAGATCAAGC GGGTCGGCCT CGCCGCTGAA
ATCGATCAGC TCGCGGGCTC GCTGTCGCTC GGCCAACAGC GCATCGTCGA AATTGCCCGC
GCGCTCTGCG CCGATCCGGT GCTGCTGCTG CTCGACGAGC CGGCCGCCGG GCTGCGCCAC
ATGGAAAAGC AGCGCCTCGC CGCGCTGCTG CGTCAGCTCC GCGACGGCGG CATGTCGGTG
CTGCTGGTCG AGCACGACAT GGGCTTCGTG ATGGATCTGG CCGATCGCAT CGTCGTGCTC
GATTTCGGCA CGCGGATCGC GGAAGGCACG CCCGCCGCGA TCAGGACCAA TCCCGAAGTG
ATCAAGGCCT ATCTTGGAGC CCTGGCATGA
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| Protein sequence | MPRWLPIALF AAVMAALPMI PGIPPFWIVL LDNIGLAALV AMGLVLLTGV GGLTSFGQAA
FCGFGAYTTG YLTTVYGVSP WLTLPLSLLV AGAAAVLLGL MTVRLSGHYL PLGTIAWGIS
LYYLFSKLDF LGRNDGISRI PPLSIGTVQM FDPETIYFVI WAMVLISALL TMNLLDSRTG
RAIRALRRGH IAAEAFGVQT ARAKLLVFIY AAVLAGLSGW LYAHFQRSVN PTPFGPQAGI
EYLFIAVVGG AGYVWGGVLG AAIVIVLKEV LQGYLPMVFG GQGQLEIIVF GILLVVLLQL
APGGVWPWLS SLIPFKIRRP PIDPAAALAP RERTLAETGT LLRVERARKQ FGGVIAVNDV
SFDVHAREIV ALIGPNGAGK STTFNLITGI LTTTGGTIEL HGRPIDNTPP QQVVKLGIAR
TFQHVKLVPD MTVLENVAIG AHLRGHSGAL SSMLRFDRAD EARLLAEATR QIKRVGLAAE
IDQLAGSLSL GQQRIVEIAR ALCADPVLLL LDEPAAGLRH MEKQRLAALL RQLRDGGMSV
LLVEHDMGFV MDLADRIVVL DFGTRIAEGT PAAIRTNPEV IKAYLGALA
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