| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1885 |
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| Symbol | |
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| ID | 4022367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2114250 |
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| End bp | 2115275 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962078 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_569021 |
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| Protein GI | 91976362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.29304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.241672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAAA CGCTGCTCGC GCTGCTGCTC ACAGCCGCCG TGACGCCTAG CCTGGCGCAG
GGAGCTCCGG CGCAGGACAA GACCGTCAAC TGGAAGGTTT CGCTATGGGT GCCGCCGGCG
CATCCACTTG TTCTGGCGAC CAAGGCCTGG GCCGAGGACA TCGAGAAGGC GTCGGGCGGC
TCGATCAAAA TGGCGGTGTT CCCGTCGGAG CAACTCGGCA AGGCGTTCGA CCATTACGAC
ATGGCGCGCG ACGGCATCGC CGACGTCACC TACGTCAATC CCGGCTATCA GCCCGGCCGA
TTCCCGATCA TATCTGCGGG ACAGCTTCCG TTCGTTTTCA AGGACGGCAA GAAGGGGACG
CTGGCGCTCA ACGAATGGTA CCAGAAATAC GCAGCCACGG AGATGAAGGA CACCAAGCTG
TGTTTCGCCT TCATCCACGA TCCGGGCGCG CTACACGGCA AGAAGAAAGT CGTGATGCCG
GCCGACATGA AAGGGCTCAA GGTGCGCCCG GCGCAGTCGA CCATCGGCGA GATGGTGAAG
CTGTTCGGTG GCACCAACGT CCAGGCCTCC GCGCCGGAAG CGCGTGATGC GCTCGAGCGC
GGCGTGGCCG ACGAGATCAC GTTTCCCTGG GGCTCGGTGT TCCTGTTCGG CATCGACAAG
GTGGTCAAGT ATCACATGGA CGTGCCGCTG TATTCGACGG TGTTCACCTA CAATATCGGG
CTGAAGGCCT ATAACGCGCT GTCGCCAGGG CAGAAGAAGA TCATCGACGA CCATTGCACG
CCGGAATGGG CATCCAAGGT CACCGATCCG TGGACCGAAT TCGAGGCCAA CGGCCGCACC
AAGATGAAGG CGCTGGAAGG TCACGAGGTC TATCCACTGA CGCCAGAGCA ACTCGCCGAA
TGGAAGAAGG CGACGCAGCC GCTGAACCAG TCCTGGGCCG AAGCAGTGAA GAAGGCCGGC
GGCGACGCGG CTGCGATCGA CGGCGAACTC AAGGCCGCGC TGAAGAAGTA CGACGCCGGG
CTGTAG
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| Protein sequence | MRKTLLALLL TAAVTPSLAQ GAPAQDKTVN WKVSLWVPPA HPLVLATKAW AEDIEKASGG
SIKMAVFPSE QLGKAFDHYD MARDGIADVT YVNPGYQPGR FPIISAGQLP FVFKDGKKGT
LALNEWYQKY AATEMKDTKL CFAFIHDPGA LHGKKKVVMP ADMKGLKVRP AQSTIGEMVK
LFGGTNVQAS APEARDALER GVADEITFPW GSVFLFGIDK VVKYHMDVPL YSTVFTYNIG
LKAYNALSPG QKKIIDDHCT PEWASKVTDP WTEFEANGRT KMKALEGHEV YPLTPEQLAE
WKKATQPLNQ SWAEAVKKAG GDAAAIDGEL KAALKKYDAG L
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