| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1881 |
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| Symbol | |
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| ID | 4022363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2110090 |
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| End bp | 2111481 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962074 |
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| Product | amidase |
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| Protein accession | YP_569017 |
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| Protein GI | 91976358 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.579436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0809644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCG TGATCGATCG GCCCTCCAGT GGAACAGATG CCATGACGAA ACATCCCACG
CTCGCCTCGC TCGCAGCTGA CCTCGACGCC GGCCGCACGA CCGCGCGCAA GCTGGTCGAC
GATTGTCTGG CGCGGATCGC CGATCAGGCC GGCGAGGGCG CGCGCACCTT CATCCACGTC
GATCGCGACG CTGCGATCAA GGCAGCCGAG GCGATGGACA AGCTCCGCGA GATCAAGGCC
GCGCCGTCGC CATTCGCCGG CATTCCGATT TCGATCAAGG ATCTGTTCGA CATCAAGGGC
CAGGTCACCC GCGCCGGCTC ACGCGCGCTC GACGACAATC CGCCGGCGGA GGCCGATGCG
CCCGCAGTGG CGCGGCTGCG CCGCGCCGGC TTCGTGGTGA TCGGCCGCAC CAATATGACC
GAGTTCGCCT ATTCCGGCAT CGGCATCAAT CCGCATTACG GCACCCCGAA AGCGGCGTTC
AATCGCGATG CCGGCCACGT CCCCGGCGGC TCGTCGTCGG GCGCGGCGGT GTCCGTCGCA
GACGGCATGG CCCATGCCGG ACTTGGCACC GACACCGGCG GCTCGTGCCG GATCCCGGCG
GCGTTCAACG GCATCGTCGG CTACAAGCCG TCGCAACATC GCGTGCCGCG CGACGGCGCG
GTGCCGCTGT CATTCTCGCT CGATTCGATC GGGCCGCTGG CGCGCAGCGT CGATTGTTGC
GCTGTGCTCG ACGCGGTGCT GGCCGACGCG CCGATCGTGC CGCTCGCGCC GCGGTCGTTG
AAGGGGCTGC GGCTCGCGGT GCCGACGACG GTGGCGCTCG ACGAACTCGA CGACGCGGTG
AGCGTCGCGT TCGAACGCGC GCTGAAGACG CTCAGCGGCC ACGGCGCGAT CATCGAGAAG
ATCGAGCTGC CGGAATTCCT CGATGTCGCG CCGATGATGG CGAAGGGCGG CTTTGCGGCG
GCGGAGAGCT ATGCCTGGCA TCGCTATCTG ATCGTCGCGC AGGGCGACGT CTACGATCCG
CGGGTGCGCG AACGCATTCT GCGCGGCGAA ACGCAGAGCG CGGCAGACTA TGTCGACTTG
ATCACCGCGC GCAAATCGCT GATCGCGCGC GCGTGCGCCC GGCTTGCGCC CTATGACGCC
CTGGTGATGC CGACCACCGC CAACACCCCG CCGAAGATCG CAGATCTCGC CGACGACAAG
GCGTTCACCA AGGCCAATCT TCTGGCGCTG CGCAACTGTA CGCTGATCAA TATGATCGAC
GGCTGCGCGA TCTCCTTGCC GTGCCATCGT GACGGCGAGG CGCCGGTCGG GCTGATGCTC
GCCGGCGTCA ATGGCGCCGA TCGTGAGATC TTCGAAATCG CGGCCAGCCT GGAAATGGTG
GTCCGTGGTT GA
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| Protein sequence | MTGVIDRPSS GTDAMTKHPT LASLAADLDA GRTTARKLVD DCLARIADQA GEGARTFIHV
DRDAAIKAAE AMDKLREIKA APSPFAGIPI SIKDLFDIKG QVTRAGSRAL DDNPPAEADA
PAVARLRRAG FVVIGRTNMT EFAYSGIGIN PHYGTPKAAF NRDAGHVPGG SSSGAAVSVA
DGMAHAGLGT DTGGSCRIPA AFNGIVGYKP SQHRVPRDGA VPLSFSLDSI GPLARSVDCC
AVLDAVLADA PIVPLAPRSL KGLRLAVPTT VALDELDDAV SVAFERALKT LSGHGAIIEK
IELPEFLDVA PMMAKGGFAA AESYAWHRYL IVAQGDVYDP RVRERILRGE TQSAADYVDL
ITARKSLIAR ACARLAPYDA LVMPTTANTP PKIADLADDK AFTKANLLAL RNCTLINMID
GCAISLPCHR DGEAPVGLML AGVNGADREI FEIAASLEMV VRG
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