Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1874 |
Symbol | |
ID | 4022356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2100273 |
End bp | 2101331 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637962067 |
Product | hypothetical protein |
Protein accession | YP_569010 |
Protein GI | 91976351 |
COG category | [S] Function unknown |
COG ID | [COG2855] Predicted membrane protein |
TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.393392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTC GCACAAACGC AAAAGCGTAT CGGCCCCACC CCCGCACCAC ACGGATCGGC GCACGCCTTG CTGCGATCGC GCCTGGCGTA TTGCTGACGG CTGCGATTGC CGCCATCGCA CTGGCGCTGC GCACAATCCC GGCGGCGGCC GGCGCAAGCC CGATGCTGCT CGCGATCCTA ATCGGCATCG TCGCGCATAA TGTCGTCGGT ACGCCGCAAT GGGCCGTGCC GGGCATCAAG TTCAGCCTGC GACGGGTTCT GCGCATCGCC ATCATCCTGC TCGGGCTGCA ACTGACGGCA GCGCAATTGA TAGAGGTCGG AGGCCAAGGG CTGGCGATCA TCGCCGCGAC ATTGCTTGCA ACCTTCAGCT TCACGATCTG GCTCGGCCGC GTGCTCGGCG TCGACCGCAA GCTCGCCGAG CTGATCGCGG CCGGCACCTC GATCTGCGGC GCCTCCGCGA TCATCGCAAC AAATACCGTC ACCAAGGCGG AGGACGAAGA CGTCGCCTAC GCCGTCGCCT GCGTCACCGT GTTCGGTTCG CTGGCGATGG TCGGCGCACC GCTGCTGCAG GGCGCGCTCG GCCTCGACGC CCACAGCTTC GGGCTGTGGA CCGGCGCCTC GATCCACGAG ATCGCGCAGG TCGTCGCCGC GAGCTTCCAG GCCGGCCCAA CCGCCGGCGA ATTCGGCACC ATCGCGAAAC TCGCGCGGGT GATGATGCTG GCGCCGCTGG TGATCGGTCT CGGGATGCTG GCGCGCGCCC GCATTCGCCA CCATGCCACC GCAACGGCGG CGGCGCCGCC GATGCCGTGG TTCGTGCTCG GCTTTGTGGC GATGATCGGC GTCAACCAGT TGATTGCGAT TCCACAAGAC GCGAAAAGCT GGATCGTCGC CGCGACCAGC TTTCTGCTGT CGATGGCGCT GGCGGCGATG GGGCTCGAAA CCGATCTGCG CAAACTCGCC GCGCGCGGCC TTCGCCCTGC TCTGCTCGGC TTAACCGCGG CGCTGTTCAT CGCAGGGTTT TCGCTGAGCT TGATCAAACT CACAGGATGG CATGGATGA
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Protein sequence | MTSRTNAKAY RPHPRTTRIG ARLAAIAPGV LLTAAIAAIA LALRTIPAAA GASPMLLAIL IGIVAHNVVG TPQWAVPGIK FSLRRVLRIA IILLGLQLTA AQLIEVGGQG LAIIAATLLA TFSFTIWLGR VLGVDRKLAE LIAAGTSICG ASAIIATNTV TKAEDEDVAY AVACVTVFGS LAMVGAPLLQ GALGLDAHSF GLWTGASIHE IAQVVAASFQ AGPTAGEFGT IAKLARVMML APLVIGLGML ARARIRHHAT ATAAAPPMPW FVLGFVAMIG VNQLIAIPQD AKSWIVAATS FLLSMALAAM GLETDLRKLA ARGLRPALLG LTAALFIAGF SLSLIKLTGW HG
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