| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1873 |
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| Symbol | |
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| ID | 4022355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2099395 |
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| End bp | 2100276 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962066 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_569009 |
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| Protein GI | 91976350 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.367542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGG AACAGCTCCG CATCTTCATC GCGGTCGCCG AGCAGCAGCA TATGACGCGC
GCCGCGAGCG GACTGAACCT CACCCAATCT GCCGCCAGCG CAGCGATCGC CGCACTGGAA
TCGCGCTACG ATGTCAAACT GTTCGATCGC GTCGGTCGCG GCATCGCGCT GACCCAGGCA
GGTCGCGAAT TTCTCGACGA AGCCCGCGCC GTCGTCGCTC GCGCCAGGGC CGCGGCGAAG
GCGCTCGACG ATCTCGCGGG TTTGAAGCGT GGCGCGCTCA GCCTCGCCGT CAGCCAGACC
ATCGGAAACT ACTGGTTGCC GCCGCGACTT CTCGACTTCC AGCGTACTTA TCCAGGGATC
GAGCTGCAGG TCTCGATCAC CAATACGGAA CAAGTCGCAA GAGCAGTGCG CGAAGGCCGC
GCCGATCTCG GGCTGGTCGA AGGCGAGGTC GACGATTCGT CGCTGGCGAG CCGCCGCATC
GACGGCGACA GCCTTGCTGT CGTAGTCGGC AAACGCCACC CTTGGGTCGG GCAGACGCGG
ATCTCGGCCA GCAAACTAAT GACCACCGGC TGGGTGCTGC GGGAGCGCGG CTCGGGCACG
CGGTCGATAT TCGAGGCTGC GCTGCACAAC GCCGGCGTCG ATCCATCCCA TCTGGACGTC
AAATTGGAAC TTCCTTCCAA CGAGGCGGTT CGTACCGCGA TTGAGTGCTC AGACTACGCC
GCAGCCATCT CAGATCTAGT GGCGGCGCCG TCGCTCGCGG CGGCGACCCT GCATCGAGTC
CAGTTCGATT TGCCGCGCCG TTCGTTCTTT GTGCTACGTC ACAAAGAGCA CAGCGACGTC
CGGCCAGTGA ACGCCTTACT CAAATCGTTA CAAACAGATT GA
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| Protein sequence | MTLEQLRIFI AVAEQQHMTR AASGLNLTQS AASAAIAALE SRYDVKLFDR VGRGIALTQA
GREFLDEARA VVARARAAAK ALDDLAGLKR GALSLAVSQT IGNYWLPPRL LDFQRTYPGI
ELQVSITNTE QVARAVREGR ADLGLVEGEV DDSSLASRRI DGDSLAVVVG KRHPWVGQTR
ISASKLMTTG WVLRERGSGT RSIFEAALHN AGVDPSHLDV KLELPSNEAV RTAIECSDYA
AAISDLVAAP SLAAATLHRV QFDLPRRSFF VLRHKEHSDV RPVNALLKSL QTD
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