Gene RPD_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1862 
Symbol 
ID4022344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2083888 
End bp2084688 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID637962055 
Productenoyl-CoA hydratase 
Protein accessionYP_568998 
Protein GI91976339 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0819441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.192366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA AACACGTCAC GCTCGATTTC GACGGACCGG TCGCGATCCT GAAGCTCGAC 
CATCAGGAAG TGATGAACGC GGTCTCGATC GACATGCTGG GCGGGCTCGG CGAAGCACTC
GACGTGATCG AAGAGAAGCG CGCCGAAGTA CGCTGCCTGG TCATCACCGG CGCGGGCCGC
GCGTTCTGCA CCGGCGCCAA TCTGCAGGGC CGCAATTCGG GCGGCAACAT GAGCCAGAGC
GGAAAAGGCG CCGGAGCTGC GCTGGAGACT GCGTTCCATC CGTTCCTGCG CCGGCTGCGC
AAGCTGCATT GTCCGATCGT CACCTCGGTC AACGGCGCCG CGGCGGGCGC CGGGATGAGT
TTTGCCCTGA TGGGCGACAT GATCCTGTGC GCGCGTTCGT CCTACTTCCT GCAGGCGTTT
CGTCGCATTG GCCTGGTGCC CGATTGCGGT TCGACCTGGT TGCTGCCGCG TCTCGTCGGC
AAGGCACGCT CGGTCGAATT GTCGCTCCTC GGCGAAAAGC TGCCGGCCGA GAAGGCGCTG
GAATGGGGCC TCGTCAACCG CGTTTTCGAG GACTCGGAAC TGTGGGCGGA GACCGTCAAG
CTCGCTCATG AACTCGCCAA TGGCCCGACG ATTGCGCTGT CGTTGATCCG CAAGTTGTAT
TGGGACAGCC CGGAGAACTC GTTCGAGCAG CAGCTCAACC TTGAATTCGA ATCCCAGCGC
ATCGCCGGCG CTACCGACGA TTTCAAGGAA GGCGTCGGCG CGTTTCTCGA AAAGCGCCCC
GCGCAGTTCA AGGGCAAATA A
 
Protein sequence
MQFKHVTLDF DGPVAILKLD HQEVMNAVSI DMLGGLGEAL DVIEEKRAEV RCLVITGAGR 
AFCTGANLQG RNSGGNMSQS GKGAGAALET AFHPFLRRLR KLHCPIVTSV NGAAAGAGMS
FALMGDMILC ARSSYFLQAF RRIGLVPDCG STWLLPRLVG KARSVELSLL GEKLPAEKAL
EWGLVNRVFE DSELWAETVK LAHELANGPT IALSLIRKLY WDSPENSFEQ QLNLEFESQR
IAGATDDFKE GVGAFLEKRP AQFKGK