Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1860 |
Symbol | |
ID | 4022342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2081149 |
End bp | 2082813 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962053 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_568996 |
Protein GI | 91976337 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.135048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.340753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATGG GCGAGACTCG GACGGGCAAC GAGCCGCAAG CGCGATACGA CGTCGTCGTT GTCGGCGCGG GCTTTGCCGG ACTGTACTTG CTGCACAGGC TGCGCGGGCA GGGGCTTTCG GTTCGTGTCT TCGAGCAGGG TTCGGGCGTC GGTGGCACAT GGTACTGGAA TCGCTATCCT GGCGCGCGCT GCGACGTCGA GAGCATGCAG TACTCCTACT CGTTCTCCGA CGAGTTGCAG CAGCAATGGG ACTGGAGCGA GCGCTACGCG CCGCAGCCCG AGATCCTGGC CTACGCCAAT CACGTCGCCG ACCGCTTCGA TCTGCGACGC GATATCCAGT TCGACACACG CGTGGAGAGC GCGGTGTTCG ATGAGACTGC GCGGCGATGG AGGGTGACCA CCGCGGGAGG TGAAACTTCG ACCGCGCAAT TCGTGGTGCT CGCCACTGGT TGTCTGTCGA ACGCACGGAT GCCGAATATC GCCGGCATCG CCGATTATGA AGGCAAAACC TATCACACCG GACATTGGCC GCACGAGCCG ATCGACTTCA CCGGTCAGCG CGTCGGCGTG ATCGGCACAG GATCGTCGGC GATTCAGTCG ATCCCGCTGA TTGCCGAACA GGCGAGCCAG CTCGTGGTGT TTCAGCGCAC GGCCAATTTC TCGGTGCCGG CCCGCAATGC GCCGTTGAGG CCGGAAGAGC GCAAGCAATT TCGCGACAAC TATCCGGAGA TCCGTCGCAT CGCGCGCGAG GAGATGCGCA ACGGCATCGT CACCGCGCCG CCGGAGAAGG GTGCACTCGA CGAGCCCGAC GAAGCACGGC GGCGAAACTA CGAACGCCGG TGGACGCGCG GCGGCCTGAC CTTCATGGCG GCCTACAACA ATCTCGCGTT GGAAAAGGCC GCGAACGACA CCGCAGCCGA TTTCGTCCGC GCCAAGATCG CCGAGATCGT GAAGGACCCA GTGGTCGCGA AGCTGCTACA GCCGGACAGT CATCCGATCG GCTCCAAGCG GATCTGCGTC GATACTGACT ATTATGCGAC CTTCAACCGG GACAATGTCG AGCTTGTCGA CCTTCGCGCC GACCCGATCG AGCAGATCAC GAGGCATGGC GTTCGCGCTG GCGACAAGGA GTATCCGCTC GACGCCATCG TCTTCGCCAC CGGCTTCGAT GCTATGACCG GCTCGGTCAC GAAAATCGGC ATTAAAGGGA GGAATGGCCG AACCCTCAAC GCAAAATGGG CGGAAGGACC GCGCACCTTT CTCGGCCTGA TGAGCGAGGG CTTTCCCAAT CTGTTCCTGA TCACCGGCCC CGGCAGCCCA TCGGTGCTGA GCAACATGAT CGTCTCGATC GAGCAGCATG TCGACTGGAT CGCCGATTGC CTCGCAGACA TGCGACGGCA GGGGCTCGAC TGCATCGAGG CGACCAAGGA AGCCGAGGAT AACTGGGTCG CTCACGTCAA CGAGGTCGCC TCTGGCACGC TGTATCCGCA GGCAAACTCC TGGTACATGG GCGCGAATGT TCCCGGCAAG CCGCGCGTCT TCATGCCCTA TATCGGCGGC GTCGGCGTCT ACCGCCAGAT TTGCAACGAT GTCGCGACGA GTGGCTATCA GGGATTCGCG TTGAGCGGCG ATGCGATTAC GAAGCGCGCT GCTGCGTCAT CCTGA
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Protein sequence | MAMGETRTGN EPQARYDVVV VGAGFAGLYL LHRLRGQGLS VRVFEQGSGV GGTWYWNRYP GARCDVESMQ YSYSFSDELQ QQWDWSERYA PQPEILAYAN HVADRFDLRR DIQFDTRVES AVFDETARRW RVTTAGGETS TAQFVVLATG CLSNARMPNI AGIADYEGKT YHTGHWPHEP IDFTGQRVGV IGTGSSAIQS IPLIAEQASQ LVVFQRTANF SVPARNAPLR PEERKQFRDN YPEIRRIARE EMRNGIVTAP PEKGALDEPD EARRRNYERR WTRGGLTFMA AYNNLALEKA ANDTAADFVR AKIAEIVKDP VVAKLLQPDS HPIGSKRICV DTDYYATFNR DNVELVDLRA DPIEQITRHG VRAGDKEYPL DAIVFATGFD AMTGSVTKIG IKGRNGRTLN AKWAEGPRTF LGLMSEGFPN LFLITGPGSP SVLSNMIVSI EQHVDWIADC LADMRRQGLD CIEATKEAED NWVAHVNEVA SGTLYPQANS WYMGANVPGK PRVFMPYIGG VGVYRQICND VATSGYQGFA LSGDAITKRA AASS
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