Gene RPD_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1855 
Symbol 
ID4022337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2073983 
End bp2074765 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID637962048 
Producthydroxypyruvate isomerase 
Protein accessionYP_568991 
Protein GI91976332 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCT TCGCTGCAAA TCTCAGTCTG ATGTTCAACG AGAACGCTTT CCTCGATCGC 
TTCGACGCCG CGGCCGCGGC AGGCTTCACC GCGGTCGAGT TCCTGTTTCC GTATGACCAC
AGCCCGGAGG ACATCGCCGA ACGGCTCAGG CGCAACAATC TCGTGCAGGC GCTGTTCAAT
CTGCCGCCGG GCGATTGGGC TGCGGGCGAA AAGGGTTTTG CTGCGCGACC GGACAAGTTC
GAGAAGCTGC AGCAGAGTTT GCGCATCGCG CTGCCCTATG CGTTGGCGAC CGGGGTCAAG
CGCGTGCATC TGATGGCCGG CATCGCCGAC CGGAACGACG TGGCGGCGGT GGTCGCATTC
CGTCGCTCGC TCGCGGTCGC GGCGCATTTC TTTGCCCCGC ACGGTATCGA CGTCGTGATC
GAGCCTCTCA ACAAGCGCGA CGTCCCGGGA TATTTCCTCG ACGATTTCGA GTTCGCCCGC
GATCTGATCC GCGAACTCGA CGTTCCCAAT GTGAAGCTGC AGTTCGACGT CTATCATTGC
CAGATTTTGC ACGGCGATGT CGCCATGCGG CTGCGCGAGA TGATGCCGAT CGTCGGCCAC
ATCCAGATCG CCAGCGTTCC CTCAAGGAAC GAACCGGACA GCGGAGAACT GAACTACCCG
TTCCTGTTCG AGGAATTCGA CCGGCTCGGC TACGCCGGAT TCGTCGGCGC CGAATATCGG
CCGCGCGGTG CGACTGTGGA TGGTCTCGGC TGGTTCGCGC CCTACGCAGG AACACGGACG
TGA
 
Protein sequence
MPRFAANLSL MFNENAFLDR FDAAAAAGFT AVEFLFPYDH SPEDIAERLR RNNLVQALFN 
LPPGDWAAGE KGFAARPDKF EKLQQSLRIA LPYALATGVK RVHLMAGIAD RNDVAAVVAF
RRSLAVAAHF FAPHGIDVVI EPLNKRDVPG YFLDDFEFAR DLIRELDVPN VKLQFDVYHC
QILHGDVAMR LREMMPIVGH IQIASVPSRN EPDSGELNYP FLFEEFDRLG YAGFVGAEYR
PRGATVDGLG WFAPYAGTRT