Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1855 |
Symbol | |
ID | 4022337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2073983 |
End bp | 2074765 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637962048 |
Product | hydroxypyruvate isomerase |
Protein accession | YP_568991 |
Protein GI | 91976332 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCT TCGCTGCAAA TCTCAGTCTG ATGTTCAACG AGAACGCTTT CCTCGATCGC TTCGACGCCG CGGCCGCGGC AGGCTTCACC GCGGTCGAGT TCCTGTTTCC GTATGACCAC AGCCCGGAGG ACATCGCCGA ACGGCTCAGG CGCAACAATC TCGTGCAGGC GCTGTTCAAT CTGCCGCCGG GCGATTGGGC TGCGGGCGAA AAGGGTTTTG CTGCGCGACC GGACAAGTTC GAGAAGCTGC AGCAGAGTTT GCGCATCGCG CTGCCCTATG CGTTGGCGAC CGGGGTCAAG CGCGTGCATC TGATGGCCGG CATCGCCGAC CGGAACGACG TGGCGGCGGT GGTCGCATTC CGTCGCTCGC TCGCGGTCGC GGCGCATTTC TTTGCCCCGC ACGGTATCGA CGTCGTGATC GAGCCTCTCA ACAAGCGCGA CGTCCCGGGA TATTTCCTCG ACGATTTCGA GTTCGCCCGC GATCTGATCC GCGAACTCGA CGTTCCCAAT GTGAAGCTGC AGTTCGACGT CTATCATTGC CAGATTTTGC ACGGCGATGT CGCCATGCGG CTGCGCGAGA TGATGCCGAT CGTCGGCCAC ATCCAGATCG CCAGCGTTCC CTCAAGGAAC GAACCGGACA GCGGAGAACT GAACTACCCG TTCCTGTTCG AGGAATTCGA CCGGCTCGGC TACGCCGGAT TCGTCGGCGC CGAATATCGG CCGCGCGGTG CGACTGTGGA TGGTCTCGGC TGGTTCGCGC CCTACGCAGG AACACGGACG TGA
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Protein sequence | MPRFAANLSL MFNENAFLDR FDAAAAAGFT AVEFLFPYDH SPEDIAERLR RNNLVQALFN LPPGDWAAGE KGFAARPDKF EKLQQSLRIA LPYALATGVK RVHLMAGIAD RNDVAAVVAF RRSLAVAAHF FAPHGIDVVI EPLNKRDVPG YFLDDFEFAR DLIRELDVPN VKLQFDVYHC QILHGDVAMR LREMMPIVGH IQIASVPSRN EPDSGELNYP FLFEEFDRLG YAGFVGAEYR PRGATVDGLG WFAPYAGTRT
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