Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1851 |
Symbol | |
ID | 4022333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2071150 |
End bp | 2071854 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962045 |
Product | ABC transporter related |
Protein accession | YP_568988 |
Protein GI | 91976329 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0531443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.470298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTCGG TGCGTGAGGT CACCACGGCC TATAAGGGCC TGGTCGCGAT TTCGCAGGTT TCGATCGAGG TCGAGAAGGG CGAGATCGTC TGCGTTGCCG GCGCTAACGG CGCCGGAAAG TCGACGCTGT TGAAATCGAT TGCCGGCGCC GAGCGGCCGC GCTCCGGGCA GGTGTCGTTC GATGGCGAGC GGATCGACGG CACGGCACAG CATCTGATCA CCGCCCGCGG CATCGCTTAT GTGCCGGAAA ACCGAAGGCT GTTTCCGCGT TTGTCGGTGC ACGACAATCT GCGGCTCGGC AGCTATCTGT TCCGCGGCAA GGTGGATCGC GAGCAACCCC TGGAACTGGT GTTCAGCCTG TTTCCGCGGC TGAAGGAGCG GCTCGAGCAG CGCGCCGAGA CGCTGTCGGG CGGCGAGCAG CAGATGCTGG CGATCGGGCG GGCACTGATG ACGCGGCCGC GGCTGCTGAT GCTGGACGAG CCGTCGCAGG GCATCATGCC GAAGCTCGTC AGCGAGATCT TCCAGGCGGT GAAGAAGATC CGCGACGCCG GCATGACGGT TCTGATCGTC GAGCAGCGCA TGGCCGAATG CCTCGAGATC GCCGACCGCG CCTACATCCT GCAGACGGGC AGGGTGCTGA TGCAGGGCAA GTCCGCCGAG TTGATGGACA ACCCGGACGT TCGCAAGGCG TATCTGGGAT TGTAA
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Protein sequence | MLSVREVTTA YKGLVAISQV SIEVEKGEIV CVAGANGAGK STLLKSIAGA ERPRSGQVSF DGERIDGTAQ HLITARGIAY VPENRRLFPR LSVHDNLRLG SYLFRGKVDR EQPLELVFSL FPRLKERLEQ RAETLSGGEQ QMLAIGRALM TRPRLLMLDE PSQGIMPKLV SEIFQAVKKI RDAGMTVLIV EQRMAECLEI ADRAYILQTG RVLMQGKSAE LMDNPDVRKA YLGL
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