| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1841 |
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| Symbol | |
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| ID | 4022323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2060790 |
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| End bp | 2061917 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637962035 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_568978 |
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| Protein GI | 91976319 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.473858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACGC TGAATCACTG CGCAGCTCAC GAATTCGAGG GACAAGCCTT GAATACCAAG
AAGAACGAAT ATCGGATCGC GGTTATTCCG GGAGACGGCA TCGGCAAGGA AGTGATGCCG
GAGGGACTGC GCGCGCTCGA AGCCGCGGCG AAGAAGCACC GCGTCAAGCT CGCGTTCGAT
CATTTCGACT TCGCGAGCTA CGACTACTAC GAAAAGCACG GCCAGATGAT GCCGGACGAC
TGGAAGGAAG CGATCGGCGG GCACGACGCG ATCTTCTTCG GTGCTGTCGG CTGGCCGGAG
AAGATCCCCG ATCACATTTC GCTGTGGGGC TCGCTCATCA AGTTTCGCCG CGAGTTCGAT
CAGTACGTCA ATCTGCGCCC GGTGCGGCTG ATGCCGGGCG TGCCGTCGCC GCTCGCCGGC
CGCAAGCCGG GCGATATCGA TTTCTGGGTG GTGCGCGAGA ACACCGAGGG TGAGTATTCA
TCGGTCGGCG GCCGTATGTT TCCTGACACC GACCGCGAAT TCGTGACGCA GCAGACGGTG
ATGACCCGGA CCGGCGTCGA CCGGATTCTG AAATTCGCTT TCGAACTTGC GCTGTCGCGG
CCGAAGCGGC ATTTGACCTC GGCCACCAAA TCGAACGGCA TCTCGATCAC CATGCCGTAT
TGGGACGAGC GGGTCGAGGC GATGGCGAAA CGCTATCCCG ATGTGAAGTG GGACAAGTAT
CACATCGATA TTCTCACCGC GCATTTCGTT CTGCATCCGG ATTGGTTCGA CGTCGTGGTC
GGCTCCAATC TGTTCGGTGA CATTCTGTCG GACCTCGGTC CGGCCTGCAC CGGGACGATC
GGGATTGCGC CGTCCGGCAA CATCAATCCG GAAGGCAATT TCCCGAGCGT GTTCGAGCCG
GTGCACGGCT CGGCGCCGGA TATTGCGGGG CAGGGCATCG CCAATCCGAT CGGGATGATC
TGGTCGGGCG CGATGATGCT GGAGCATCTC GGCGAGAAGA CTGCCGCCGA CGCGATCGTC
AAGGCGATCG AACGCACGCT CGCCGAGCGG ACGCTCCGCA CCCGTGATCT CGGCGGTCAG
GCCGACACGA CCGCCTGCGG CAAGGCGGTG GCGGAGATGC TGGAGTAG
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| Protein sequence | MLTLNHCAAH EFEGQALNTK KNEYRIAVIP GDGIGKEVMP EGLRALEAAA KKHRVKLAFD
HFDFASYDYY EKHGQMMPDD WKEAIGGHDA IFFGAVGWPE KIPDHISLWG SLIKFRREFD
QYVNLRPVRL MPGVPSPLAG RKPGDIDFWV VRENTEGEYS SVGGRMFPDT DREFVTQQTV
MTRTGVDRIL KFAFELALSR PKRHLTSATK SNGISITMPY WDERVEAMAK RYPDVKWDKY
HIDILTAHFV LHPDWFDVVV GSNLFGDILS DLGPACTGTI GIAPSGNINP EGNFPSVFEP
VHGSAPDIAG QGIANPIGMI WSGAMMLEHL GEKTAADAIV KAIERTLAER TLRTRDLGGQ
ADTTACGKAV AEMLE
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