Gene RPD_1831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1831 
Symbol 
ID4022313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2048838 
End bp2049623 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID637962025 
Productenoyl-CoA hydratase 
Protein accessionYP_568968 
Protein GI91976309 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID[TIGR02280] phenylacetate degradation probable enoyl-CoA hydratase paaB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.728696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAAA TCCTGATCGA CGATCGGGGG TCTTGGCGCG TCGTCACGCT GAACCGTCCG 
GACCGGCTGA ACTCTTTCAA CGAAGCGATG CATCGCGCGC TGGCCTCGGC GCTCGACGAG
GCGCGCGATC CGGCCTGCCG TGGCGTGCTG CTGACCGGCG CGGGCCGCGG CTTCTGCGCC
GGGCAGGACC TCGCCGACGT CACTGTCGCC GAAGGCTCCG CACCCGATCT CGGCGTCACC
ATCGAGACCT TCTACAATCC GCTGGTGCGG CAGATCCGCG GGCTCGACAA GCCCGTCGTC
TGCGCGGTGA ACGGCACCGC GGCCGGCGCC GGGGCCAATA TCGCGCTGGC CTGCGATCTG
GTGATCGCGG CGCGCTCGGC GAAATTCATC CAGTCATTCG CCAAGATCGG CCTGGTGCCG
GATTCCGGCG GCACCTGGTT TCTGCCGCGT CTGATCGGCG ACGCGCGGGC GCGCGGGCTG
GCGATGCTGG CCGAGCCGAT CAGCGCCGAG ACCGCAGCGA ATTGGGGGCT GATCTGGCGC
GTCGCCGACG ACGACAGGCT GATCAGCGAA GCCGAGGCGC TGACCGCCCA TCTCGCCACC
CAGCCGACCC AGGGGCTGGC GCTGATCAAG CAGGCGCTGG CGGCGGCGGC GACCTCGACG
CTCGATGCGC AGCTCGATCT CGAACGCGAC CTGCAGCGCC AGGCCGGGCG CACGCCGGAC
TACGCCGAGG GCGTCGACGC CTTCATCGGC AAACGCGCGC CGACATTCAC CGGGAGAGCG
CATTGA
 
Protein sequence
MDEILIDDRG SWRVVTLNRP DRLNSFNEAM HRALASALDE ARDPACRGVL LTGAGRGFCA 
GQDLADVTVA EGSAPDLGVT IETFYNPLVR QIRGLDKPVV CAVNGTAAGA GANIALACDL
VIAARSAKFI QSFAKIGLVP DSGGTWFLPR LIGDARARGL AMLAEPISAE TAANWGLIWR
VADDDRLISE AEALTAHLAT QPTQGLALIK QALAAAATST LDAQLDLERD LQRQAGRTPD
YAEGVDAFIG KRAPTFTGRA H