Gene RPD_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1827 
Symbol 
ID4022309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2045140 
End bp2045640 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content67% 
IMG OID637962021 
Productphenylacetate-CoA oxygenase, PaaJ subunit 
Protein accessionYP_568964 
Protein GI91976305 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0959746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCCG CGCCCGGCGA CGCCGAGTTG CGCCAGCGCG CCTGGGACGC CGCCGCGACC 
GTGGTCGATC CGGAAATTCC GGTGCTGACC ATCGCCGATC TCGGCGTGCT GCGCGAGGTC
TCGGTCGCTG AAGGTCGCGT CGAGATCGCG ATCACGCCGA CCTATTCGGG CTGCCCGGCG
ATGAACATGA TCACGCTGGA AATCGAGATG GCGCTGGCGC GCGCCGGCAT CAGCGACGCG
CGCGTCAGAA CGGTGCTGGC GCCGGCCTGG ACCACCGACT GGATGAGCGC GGAAGGCCGC
GCCAAGCTGA AGGATTACGG CATCGCGCCG CCGCAGATCG CCAGCTCCCG CCGCGCTTTG
TTCGGCACGC TGGAAATCGC GTGTCCGCAA TGCGGCTCGA TCGACACCGA GCAGCTGTCG
GAATTCGGCT CGACCTCCTG CAAGGCGTTG TGGCGCTGCA AGGCCTGTCG AGAGCCGTTC
GATTACTTCA AGTGTCATTG A
 
Protein sequence
MSPAPGDAEL RQRAWDAAAT VVDPEIPVLT IADLGVLREV SVAEGRVEIA ITPTYSGCPA 
MNMITLEIEM ALARAGISDA RVRTVLAPAW TTDWMSAEGR AKLKDYGIAP PQIASSRRAL
FGTLEIACPQ CGSIDTEQLS EFGSTSCKAL WRCKACREPF DYFKCH