Gene RPD_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1802 
Symbol 
ID4022284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2015783 
End bp2017000 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content66% 
IMG OID637961996 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_568939 
Protein GI91976280 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.244015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA CGGTCTTGAT TGCTGGAGCC GGACACGCCG GATTTCAGGT CGCCGTCTCG 
CTGCGCCAGG CCAAGTACAC CGGTCGCATC GCGCTGATCA ACGACGAGAA GCATCTGCCG
TATCAACGGC CGCCGCTGTC GAAGGCCTAT CTCAAGAGCG GTGGCGATCC GAACTCGCTG
ATGTTCCGGC CGGAGAAGTT CTTCCAGGAC CAGACCATCG AGCTGATCTC GGATCGTGCA
GTGTCGATCG ATCGCGCCGC CCGCAAGCTG CTGCTCGCCT CCGGCGAAGC GATCGACTAC
GGCCATCTGG TGCTCGCCAC CGGCGCACGC AACCGCCAGC TCGACGTGCC GAACGCGACG
CTCGACGACG TGTTGTATCT GCGCACGCTC GACGAGAGCG AAATGGTGCG CCAGCGGATG
CCGGAAAAGA AGCACGTCGT GGTGATCGGA GCCGGCTTCA TCGGTCTGGA ATTCGCCGCC
ACCGCCCGCG GCAAGGGCAT GGAGGTCGAC GTCGTAGAGC TCGCCCCGCG GGTGATGGCG
CGCGCGGTCA CGCCGGAAAT CTCGAGCTAC TTCCACGACC GCCACACCGC GGCGGGCATC
CGCATCCATT ACGGCGTGCG CGCTACCGAG ATCGAAGGCA AGGACGGCCA CGTCAGCGGC
GTGGCGCTCA GCGACGGCCG CACGCTGCCG TGCGATCTGG TCGTGGTCGG CGTCGGCGTG
ATCCCGAATG TCGAGCTGGC GTCGGCGGCC GGGCTGCCGA CCGCGTCGGG CATCATCGTC
GACGAGCAGC TCCTCACCGA GGATCCGAAC ATCTCGGCGA TCGGCGATTG CGCGCTGTTC
AACAGCGTGC GGTTCGGCGA GGTGATGCGG CTGGAGTCGG TACAGAACGC CACCGATCAG
GCACGCTGCG TCGCGTCGCG GCTCACCGGC GAGCCCAAGA CCTATGACGG CTATCCGTGG
TTCTGGTCCG ATCAGGGCGA CGACAAGCTG CAGATCGCGG GCCTCACCGC CGGCTTCGAC
AGCGTCGCGG TGCGCGGCAG CGTCGCCGAG CGCTCGTTCT CGGCGTTCTG CTACAAGGAC
GGCAAGTTGA TCGGCGTCGA GTCGGTCAAT CGCGCCGCCG ACCACGTGTT CGGCCGCAAG
ATCCTGCCGC TCGACAAGTC GATCACGCCG GAGCAAGCCG CCGATCTCAC CTTCGACCTG
AAGAAGGCGA TCGCGTAG
 
Protein sequence
MNDTVLIAGA GHAGFQVAVS LRQAKYTGRI ALINDEKHLP YQRPPLSKAY LKSGGDPNSL 
MFRPEKFFQD QTIELISDRA VSIDRAARKL LLASGEAIDY GHLVLATGAR NRQLDVPNAT
LDDVLYLRTL DESEMVRQRM PEKKHVVVIG AGFIGLEFAA TARGKGMEVD VVELAPRVMA
RAVTPEISSY FHDRHTAAGI RIHYGVRATE IEGKDGHVSG VALSDGRTLP CDLVVVGVGV
IPNVELASAA GLPTASGIIV DEQLLTEDPN ISAIGDCALF NSVRFGEVMR LESVQNATDQ
ARCVASRLTG EPKTYDGYPW FWSDQGDDKL QIAGLTAGFD SVAVRGSVAE RSFSAFCYKD
GKLIGVESVN RAADHVFGRK ILPLDKSITP EQAADLTFDL KKAIA