Gene RPD_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1800 
Symbol 
ID4022282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2013010 
End bp2014143 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID637961994 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_568937 
Protein GI91976278 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0148335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAG CCAGCCCAGC GGTCGCCGGA ACGCGCGTGC AGCCATCGGC TGCGCTGCAG 
TTGTCCGTTG TCGTTCCGAC TTTCAACGAA CGCGACAATG TCGAGGTGCT GTTCCGCAAG
CTGGAAGCGG CGCTCGCGGG CGTGGCGTGG GAAGTCATCT ATGTCGATGA CAATTCTCCC
GACGGCACCT GGCAGGTGGT GCGCGAACTG GCCTTGCGCG ATCCGCGGGT GCGCTGCATC
CGGCGGATCG GGCGGCGCGG CCTCTCGGGC GCCTGCATCG AGGGCATCCT CGCCGCCAGC
GCGCCGTTCG CGGCGGTGAT GGACGCCGAC CTGCAGCACG ACGAAACCCA GCTCGCGAAA
ATGCTCGACC TGCTGGAGCG TGGCGCCGCC GATCTCGTGG TCGGCAGCCG CTATATCGCC
GGCGGCAGCG CCGACAGCTT CGACCGGCAG CGCGCGGGTT TCAGCGCCTT GGCCACCGCG
GTGGCGCGCA AGGTGCTGAA GGTCGAGATC GCCGATCCGA TGAGCGGCTT CTTCATGATC
CGCCGCGATC GCTTCGAACA GCTCGCGCCG CAGCTTTCGA CCCAGGGCTT CAAAATCCTG
CTCGACATCG TCGCCACCGG GCAGGGCAGC CTGCGGACCG TGGAAGTGCC TTTCACGTTC
GGCTCGCGGC TGCACGGCGA GAGCAAGCTC GACTCGATGG TGGCGCTGGA TTTCCTCGGT
CTGGTGCTGG CGAAATACAG CAACGACATC CTGTCGCTGC GTTTCATCCT GTTCGCGCTG
GTCGGCTCGA CCGGCGTCGT CGTCCATTTC CTGACGCTGT ATCTGGTGCT GAAGGTGTTC
GAGCAGCCGT TCGCCGAGGC GCAGGGGGCG GCGGCGGTGG TGGCGATGAC CAGCAACTTC
ATCCTCAACA ATTTTCTGAC CTATCGCGAT CAACGACTGA AGGGTTTTGC GATCCTGCGC
GGGCTGCTGT TGTTCTACCT GGTGTGCGGC GTCGGTCTGA TCGCCAATGT CGGCGTCGCC
TTCGCGGTGT ACAACGAGCA CATCACCTGG TGGCTGGCGG GCGCCGCCGG CGCGGTGATG
GGCGTGGTCT GGAACTACGC GATGTCGGGC CTGTTCGTCT GGCGCAAGCG TTGA
 
Protein sequence
MTQASPAVAG TRVQPSAALQ LSVVVPTFNE RDNVEVLFRK LEAALAGVAW EVIYVDDNSP 
DGTWQVVREL ALRDPRVRCI RRIGRRGLSG ACIEGILAAS APFAAVMDAD LQHDETQLAK
MLDLLERGAA DLVVGSRYIA GGSADSFDRQ RAGFSALATA VARKVLKVEI ADPMSGFFMI
RRDRFEQLAP QLSTQGFKIL LDIVATGQGS LRTVEVPFTF GSRLHGESKL DSMVALDFLG
LVLAKYSNDI LSLRFILFAL VGSTGVVVHF LTLYLVLKVF EQPFAEAQGA AAVVAMTSNF
ILNNFLTYRD QRLKGFAILR GLLLFYLVCG VGLIANVGVA FAVYNEHITW WLAGAAGAVM
GVVWNYAMSG LFVWRKR