Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1793 |
Symbol | |
ID | 4022275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2006306 |
End bp | 2007247 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637961987 |
Product | ABC transporter related |
Protein accession | YP_568930 |
Protein GI | 91976271 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000132087 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.412838 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CATTGGCGGC CCACGACATC GCCATCGACG TCAAGGGGCT GACGAAATCC TTCAACGGCC GTGAGGTGGT GCACGACCTG TCGATGCAGG TGAAGCGCGG CTCGATCTAC GGCTTTCTCG GGCCGAACGG CTCCGGCAAG ACCACGACGA TCCGGATGCT GTGCGGCCTG CTGACGCCGG ACAGCGGCGA GGGCACCTGC CTCGGCTACG ACATCAGGCG CGATGCCGAC AAGATCAAGC GTCAGGTCGG CTACATGACC CAGCGCTTCA GCCTCTATCA GGATCTTTCG GTGCGCGAGA ATCTCGAGTT CGTGGCAAGA CTCTACGGCG TGCCCGACGC CCGCAATGCC GCGCGCGCGA TGATCAAGCG GCTCGGCCTG TCCGGCCGCG AGGAGCAACT CGCCGGCGAA TTGTCGGGCG GCTGGAAGCA GCGGCTGGCG CTCGGCGCCT GTACGCTGCC GAATCCGCAA TTGCTGCTGC TCGACGAGCC GACCGCAGGC GTCGACCCCA AGGCGCGTCG CGACTTCTGG AACGAGATCC ACGGCCTCGC CGCCGAAGGG CTCACCGTGC TGGTCTCGAC CCACTACATG GACGAGGCCG AGCGCTGTCA CGAGATCGCC TACATCGCCT ACGGCGCTCT GCTCGCGCAC GGCACCGTCG ACGAAGTGAT CGCCAAATCC GCGTTGGCGA CCTGGGTCGT CACCGGCGAG GGTTTGAACG CGCTGCCCCA CGAACTCGCC GGAAAGCCGG GCGTCGATAT GGTGGCGCCG TTCGGCACCA GCCTGCACAT TTCCGGCCGC GATCACGCCG CACTCGAAGC CAGTATCGCG CCATATCGCG GCCAACCCGG CCAGCACTGG CAGCACGGCG CGCCGTCGCT GGAGGATGTG TTCATCGAAC TGATGAGCCG CACCAAGGAC AATTTCCAAT GA
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Protein sequence | MTDALAAHDI AIDVKGLTKS FNGREVVHDL SMQVKRGSIY GFLGPNGSGK TTTIRMLCGL LTPDSGEGTC LGYDIRRDAD KIKRQVGYMT QRFSLYQDLS VRENLEFVAR LYGVPDARNA ARAMIKRLGL SGREEQLAGE LSGGWKQRLA LGACTLPNPQ LLLLDEPTAG VDPKARRDFW NEIHGLAAEG LTVLVSTHYM DEAERCHEIA YIAYGALLAH GTVDEVIAKS ALATWVVTGE GLNALPHELA GKPGVDMVAP FGTSLHISGR DHAALEASIA PYRGQPGQHW QHGAPSLEDV FIELMSRTKD NFQ
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