| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1791 |
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| Symbol | |
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| ID | 4022273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2004772 |
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| End bp | 2005512 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961985 |
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| Product | regulatory protein, TetR |
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| Protein accession | YP_568928 |
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| Protein GI | 91976269 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00350194 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.153158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATC ACGAACGACG CACCGCGCCG AATACCCCTA TTCTCGCGAA AACCCCGACC
AAAGCCCGCA ACCCCAGCAA GCCGCCGAAG CAGGCTGGCG CGCTGGAGGC GACGGAGCCC
ACGAAGCCGG GCGCCGCATC GACCCGCGCG CTGCGTGCCG CCGGGCGTCG CGCCGCGATC
GTCGACGCGG CGCTCGAGGA ATTCACCGCC CGCGGTTACG CCGCGACGCG GCTCGAGGAC
GTCGCGAGCC GCGCCGGCGT CGCCAAAGGC ACGATCTATC TGCACTTTGC CGACAAGGAG
GCGCTGTTTC AGGAACTGCT TCGCTCGGCC TTGCTGCCGC TGATCGAGCG TATCAGTTCG
CCGCCGCTGC CCGACGTGTC GGCGCGGGCG ATGCTGGAGA ATTTCGCACA GATCTTCGTG
CGCGAAGTCA CCCAGACCCG ACGCGCCGAT CTGCTGCGGC TGATGATGGC GGAGGGGCCG
CGGTTTCCGT CGCTCGCCGA GTTTCACTAT CGTGAGATCG TCGAGCGCGG ACTCACGGCA
ATCCGCGCCG TCATCTGTCA CGGCATTCAA CGCGGCGAAA TCCGCCACGA TGCGCTGCAG
CGCTTTCCGC AATTGGTCAT GGCGCCGGCG ATGCTAACGG TGCTCTGGCA GGGCCTGTTC
GGCCGCTACG CGCCGCTCGA CGCGCTCGGG ATGCTGCGCG CTCACATCGA CATCATCTTC
GACGAAGGAA AAGCGACATG A
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| Protein sequence | MADHERRTAP NTPILAKTPT KARNPSKPPK QAGALEATEP TKPGAASTRA LRAAGRRAAI
VDAALEEFTA RGYAATRLED VASRAGVAKG TIYLHFADKE ALFQELLRSA LLPLIERISS
PPLPDVSARA MLENFAQIFV REVTQTRRAD LLRLMMAEGP RFPSLAEFHY REIVERGLTA
IRAVICHGIQ RGEIRHDALQ RFPQLVMAPA MLTVLWQGLF GRYAPLDALG MLRAHIDIIF
DEGKAT
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