Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1791 |
Symbol | |
ID | 4022273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2004772 |
End bp | 2005512 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961985 |
Product | regulatory protein, TetR |
Protein accession | YP_568928 |
Protein GI | 91976269 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00350194 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.153158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATC ACGAACGACG CACCGCGCCG AATACCCCTA TTCTCGCGAA AACCCCGACC AAAGCCCGCA ACCCCAGCAA GCCGCCGAAG CAGGCTGGCG CGCTGGAGGC GACGGAGCCC ACGAAGCCGG GCGCCGCATC GACCCGCGCG CTGCGTGCCG CCGGGCGTCG CGCCGCGATC GTCGACGCGG CGCTCGAGGA ATTCACCGCC CGCGGTTACG CCGCGACGCG GCTCGAGGAC GTCGCGAGCC GCGCCGGCGT CGCCAAAGGC ACGATCTATC TGCACTTTGC CGACAAGGAG GCGCTGTTTC AGGAACTGCT TCGCTCGGCC TTGCTGCCGC TGATCGAGCG TATCAGTTCG CCGCCGCTGC CCGACGTGTC GGCGCGGGCG ATGCTGGAGA ATTTCGCACA GATCTTCGTG CGCGAAGTCA CCCAGACCCG ACGCGCCGAT CTGCTGCGGC TGATGATGGC GGAGGGGCCG CGGTTTCCGT CGCTCGCCGA GTTTCACTAT CGTGAGATCG TCGAGCGCGG ACTCACGGCA ATCCGCGCCG TCATCTGTCA CGGCATTCAA CGCGGCGAAA TCCGCCACGA TGCGCTGCAG CGCTTTCCGC AATTGGTCAT GGCGCCGGCG ATGCTAACGG TGCTCTGGCA GGGCCTGTTC GGCCGCTACG CGCCGCTCGA CGCGCTCGGG ATGCTGCGCG CTCACATCGA CATCATCTTC GACGAAGGAA AAGCGACATG A
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Protein sequence | MADHERRTAP NTPILAKTPT KARNPSKPPK QAGALEATEP TKPGAASTRA LRAAGRRAAI VDAALEEFTA RGYAATRLED VASRAGVAKG TIYLHFADKE ALFQELLRSA LLPLIERISS PPLPDVSARA MLENFAQIFV REVTQTRRAD LLRLMMAEGP RFPSLAEFHY REIVERGLTA IRAVICHGIQ RGEIRHDALQ RFPQLVMAPA MLTVLWQGLF GRYAPLDALG MLRAHIDIIF DEGKAT
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