| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1788 |
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| Symbol | |
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| ID | 4022270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2002191 |
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| End bp | 2003792 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961982 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_568925 |
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| Protein GI | 91976266 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0303] Molybdopterin biosynthesis enzyme
[COG2068] Uncharacterized MobA-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.148843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.17866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTCG GCCCGCGACG CCCGGCGGAT GCGATCGGCG GCGTCACCGT GCATTCGCTG
CGGCAGAACG GATTGCTGCT GAAGAAGGGC ACCTCAATCG GTCCAGCCGA AGTAGCGGCG
CTGGAGCACG CTGGTGTCGC CGAGATCGTC GTGGTGCAGC TCGAGCCGGG TGACGTCTCC
GAGGATGTCG CCGCCGCTGA TGTGGCGCAG GCGGTCGCCG GCGACGGCGT CAGTGTCGAG
CGCGCCTTCA CCGGCCGCGC CAATCTCTTT GCAAAGCGTC CGGGCGTGCT GGTGGTCGAG
CGTGCCGTGG TGGATCGTGT CAACGCCATC GACGAGGCGA TCACCTTCGC GACGCTTGCC
GCGTTCAAGC CGGTGGTCGA AGGCGAGATG ATCGCGACCG TCAAGCTGAT CCCGTTCGGC
GTCGAAGGAA AGCTCCGCGA CGCCGCGGTG CTGGCCGCGC AAGGCGGCGC GTTGCGTGTC
GCGCCCTACA TGGTCAAGCG CGTCGGCGTA GTGTCGACCC AGTTGCCGGG CCTCGCGCCG
AAAGTGATCG ACAAGACGCT GCGCGTCACA GCGGAGCGGC TGGCGCCGGC CGGTGCCGTG
ATCATCGCCG AGCGCCGCAT CGCCCATGAT GAAGCCGCGT TGTCGGCGGC GCTGAAGGAG
CTGCTCGGGC TCGGCGCCGA ACTGGTGGTC GTGTTCGGCG CCTCCGCGAT CGCCGATCGG
CGGGACGTGA TCCCGGCCGC GATCGGCGCC ATCGGCGGCA CGATCGAGCA TTTCGGGATG
CCGGTCGACC CCGGCAATCT GCTGCTGATC GGCAGCGCGT CGGGCGTGCC GGTGCTCGGG
GCGCCGGGTT GCGCGCGCTC GCCGGTCGAG AACGGCTTCG ACTGGGTGCT GATGCGGCTG
CTCGCGGGGC TTCAGGTGAC GCGCGCGGAC ATCACCGGCA TGGGCGTCGG CGGCCTGTTG
ATGGAAATCG TGACGCGGCC GCAGCCGCGC CTGCCGCTGA CCGAAGGCGG TCGCAACGTC
GCCGCGATCG TGCTCGCCGC CGGCCGCTCG ACCCGGATGG GCGGACCGAA CAAACTGCTC
GCGGAGCTGA ACGGCACGCC GTTGGTGCGG ATCGTCGCCG AACAGGTGAT GGCGTCGAAG
GCGTCGCGCG CGATCGTCGT CACTGGGCAC CAGGCCGACA AGGTCGAGGC GGCGCTGTCC
GGCCTCGACG TCTCGTTCGT GCACAACCCC GCCTTTGCCG AAGGCCTGGC CTCGTCGGTG
AAGGCCGGCA TCGCCGCGGT CGCCGACGAT GCGGATGGCG CGGTGGTCTG TCTCGGCGAT
ATGCCGCTGA TCGATTCCCT CTTGATCGAC CGGCTGATCG GTGCGTTCGA TCCGGATCGC
GGCGGGCTGA TCGTGGTGCC GGTCGCGGAT GGTCGGCGCG GCAATCCGGT GTTGTGGTCG
CGTCGCTTCT TCAGCGAGCT GATGACGCTC GACGGCGACA TCGGCGCGCG CCATCTGATC
GCCAAACACG GCGAGGCCGT GACCGAAGTG CCAGTCGACG GCCACGCTGC GTTTCTCGAC
ATCGACACGC CGCAGGCGCT GGAGGAAGCT CGGCGCGGCT AG
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| Protein sequence | MRFGPRRPAD AIGGVTVHSL RQNGLLLKKG TSIGPAEVAA LEHAGVAEIV VVQLEPGDVS
EDVAAADVAQ AVAGDGVSVE RAFTGRANLF AKRPGVLVVE RAVVDRVNAI DEAITFATLA
AFKPVVEGEM IATVKLIPFG VEGKLRDAAV LAAQGGALRV APYMVKRVGV VSTQLPGLAP
KVIDKTLRVT AERLAPAGAV IIAERRIAHD EAALSAALKE LLGLGAELVV VFGASAIADR
RDVIPAAIGA IGGTIEHFGM PVDPGNLLLI GSASGVPVLG APGCARSPVE NGFDWVLMRL
LAGLQVTRAD ITGMGVGGLL MEIVTRPQPR LPLTEGGRNV AAIVLAAGRS TRMGGPNKLL
AELNGTPLVR IVAEQVMASK ASRAIVVTGH QADKVEAALS GLDVSFVHNP AFAEGLASSV
KAGIAAVADD ADGAVVCLGD MPLIDSLLID RLIGAFDPDR GGLIVVPVAD GRRGNPVLWS
RRFFSELMTL DGDIGARHLI AKHGEAVTEV PVDGHAAFLD IDTPQALEEA RRG
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