Gene RPD_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1782 
Symbol 
ID4022264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1997401 
End bp1997898 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID637961976 
Product(2Fe-2S)-binding 
Protein accessionYP_568919 
Protein GI91976260 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.381616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGGC CGATGGCCAA GATTTCCCTG ATCGTCAACG GCAATCCGGT GTCCGCGAAT 
GTCGATCCGC GCACGTTGCT GGTGCAGTTT CTGCGTGAGC ATCTGCGGCT CACAGGCACC
CACGTCGGCT GCGACACCTC GCAGTGCGGC GCGTGCGTCG TGCATCTCGA CGGCAAGGCG
GTGAAGTCCT GCACCACGCT CGCGGTGATG GCGGACGGCC ATGAGGTGAC CACGATCGAG
GGGCTGGCCG CCGACGGCGC GCCGCTGCAT CCGATGCAGG AAGCGTTTCG CGAGAATCAC
GGCCTGCAAT GCGGCTTCTG CACGCCCGGC ATGATCATGA CCGCGGTCGA TCTGGTGCAC
CGCAAGGGCA ACGATCTGTC GGACCAGACG ATTCGCGAAG AACTCGAAGG CAATCTCTGC
CGCTGCACCG GCTATCAGAA CATCGTGGTG TCGATCGCGG CCGGCGCCAA GGCGATGGCG
AATTCCGATC TCGCCTGA
 
Protein sequence
MRGPMAKISL IVNGNPVSAN VDPRTLLVQF LREHLRLTGT HVGCDTSQCG ACVVHLDGKA 
VKSCTTLAVM ADGHEVTTIE GLAADGAPLH PMQEAFRENH GLQCGFCTPG MIMTAVDLVH
RKGNDLSDQT IREELEGNLC RCTGYQNIVV SIAAGAKAMA NSDLA