Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1779 |
Symbol | |
ID | 4022261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1994612 |
End bp | 1995529 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637961973 |
Product | inner-membrane translocator |
Protein accession | YP_568916 |
Protein GI | 91976257 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.601101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.644499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATT TCGCCCAGCA GCTCATCAAC GGCCTTGTCC TCGGCTCAAT CTACGGCCTG ATCGCGATCG GCTACACGAT GGTTTACGGC ATCGTCGGCA TGATCAATTT CGCCCATGGC GACATTTTCA TGATCGGCGG CTTCATCGCC CTGATCAGCT TTTTGATCCT GGTGTCGTTC GGCCTCACCT TCGTGCCGCT GATCCTGCTG GTGGTGCTGC TGGTGTCGAT GGCGATCACC GCGCTCTACG GCTGGACCGT CGAGCGCATC GCCTACCGGC CGCTGCGGCA TTCATTCCGA CTCGCCCCGA TGCTGTCGGC GATCGGCATG TCGTTCGTGC TGATGAACTA CTCGCAGGTG GCGCAGGGCG CACGGGTGAA GCCGGTGCCG CCGATCATCA CCGGCGGCTA CACGCTGCAC GAGAGCGCCG ACGGCTTCAA CGTGCAGCTC TCCAACGTCC AGATCCTGGT GGTGATCACC ACCATCGTGC TGCTCGCGAT CTTCACCTGG CTGGTGGCGA AGACCCGGCT CGGCCGCGAC ATGCGCGCCT GCGAGCAGGA CCAGACCATG GCGTCCCTAC TCGGCGTCGA CGTCGACCGC ACCATCTCGA TGACCTTCGT GATCGGCGCT GCGCTCGCCT CGGTCGCGGG CATGATGTAC CTGCTGTATT ACGGCCTGGT CGATTTCTTC ATGGGCTTCG TCGCCGGCAT CAAGGCGTTC ACCGCCGCCG TGCTGGGCGG CATCGGCTCG CTGCCGGGCG CGATGCTCGG CGGCCTCCTG ATCGGACTGA TCGAGACGAT GTGGTCGGCC TATTTCTCGG TCGAGTACAA GGACGTCGCG GCGTTCTCGA TTCTGATCGT GGTGCTGATC TTCATGCCGA CCGGCCTGTT GGGCCGGCCG GAAGTCGAAA AAGTCTGA
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Protein sequence | MDYFAQQLIN GLVLGSIYGL IAIGYTMVYG IVGMINFAHG DIFMIGGFIA LISFLILVSF GLTFVPLILL VVLLVSMAIT ALYGWTVERI AYRPLRHSFR LAPMLSAIGM SFVLMNYSQV AQGARVKPVP PIITGGYTLH ESADGFNVQL SNVQILVVIT TIVLLAIFTW LVAKTRLGRD MRACEQDQTM ASLLGVDVDR TISMTFVIGA ALASVAGMMY LLYYGLVDFF MGFVAGIKAF TAAVLGGIGS LPGAMLGGLL IGLIETMWSA YFSVEYKDVA AFSILIVVLI FMPTGLLGRP EVEKV
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