| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1775 |
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| Symbol | |
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| ID | 4022257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1990434 |
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| End bp | 1991546 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961969 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_568912 |
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| Protein GI | 91976253 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.915027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.416814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA AGCTTCTCGG TTTGGCAGTC GGTGCGTCGC TGGCGCTCTC GACGACGGCG
CTCGCGGACG ATCTCAAGAT CGCGGTCGCC GGTCCGATGA CCGGCCCCGA GTCGGCGTTC
GGACGGCAAT TGCACAACGG TGCCCTTCAG GCGGTCGCCG ATCTCAACGC CGCCGGCGGC
GTGCTCGGCA AGAAGCTGGC GCTGCAGGTC GGCGACGACG CCTGCGATCC GAAGCAGGCG
CGCTCGATCG CCGAGAAATT CGCGGGCGAA GGCATTCCAT TCGTCGCCGG ACACTTCTGC
TCGTCGTCGT CGATCCCGGC GTCGGAAGCC TATGCCGACG GCAATGTGCT GCAGATCACC
CCGGCCTCGA CCAACCCGAC TTTCACCGAG CGCAAGCTGT GGAACGTGCT GCGGATCTGC
GGCCGCGACG ATCAGCAGGG CCTGGTCGGC GCTGACTACA TCCTCAAGCA TTACAAGGAC
AAGAACGTCG CGATCCTCAA CGACAAGACC ACTTACGGCA AGGGCCTCGC CGACGAGGCC
AAGAAGGCGC TCAACAAGGC CGGCTTCAAG GAGAAGCTGT TCGAATCCTA CAACAAGGGC
GACAAGGACT TTAATTCGAT CGTGTCGCGG CTGAAGCGCG ACAACATCGA TCTCGTCTAT
ATCGGCGGCT ATCACCAGGA GGCCGGGCTG ATCCTGCGCC AGATGCGCGA CCAGGGCATG
AAGACCGTGC TGATGGCCGG CGACGCGCTC AACGACAAGG AATTCGCCTC GATCACCGGA
CCGCTCGCCG AGGGCACGCT GTTCACTTTC GGCCCCGACC CGCGCAACAA GCCGACCGCG
AAGGCGATCG TCGAGAAGTT CAAGACCAAG AACGTCGATC CCGAAGGCTA CACGCTCTAC
ACCTACGCCG CCTTCCAGGT CTGGTCGCAA GCCGCCGCCA AGGCTAACTC CACCGACCCG
AAGAAGGTGA TGGACGCCAT CAAGGCCGGC GAGTGGGACA CCGTGCTCGG CAAGCTGGCA
TTCGACGCCA AGGGCGACAT CAAGGCGATC GACTACGTCG TCTACAAATG GGACGCCAAG
GGCAGCTATA CCGAGATCAA TCCCGGCAAG TGA
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| Protein sequence | MKLKLLGLAV GASLALSTTA LADDLKIAVA GPMTGPESAF GRQLHNGALQ AVADLNAAGG
VLGKKLALQV GDDACDPKQA RSIAEKFAGE GIPFVAGHFC SSSSIPASEA YADGNVLQIT
PASTNPTFTE RKLWNVLRIC GRDDQQGLVG ADYILKHYKD KNVAILNDKT TYGKGLADEA
KKALNKAGFK EKLFESYNKG DKDFNSIVSR LKRDNIDLVY IGGYHQEAGL ILRQMRDQGM
KTVLMAGDAL NDKEFASITG PLAEGTLFTF GPDPRNKPTA KAIVEKFKTK NVDPEGYTLY
TYAAFQVWSQ AAAKANSTDP KKVMDAIKAG EWDTVLGKLA FDAKGDIKAI DYVVYKWDAK
GSYTEINPGK
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