| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1771 |
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| Symbol | |
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| ID | 4022253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1986513 |
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| End bp | 1987211 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637961965 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_568908 |
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| Protein GI | 91976249 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.617739 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCAGC TTGCGCCCCG CCCCCTCGTG ATTGCGCCGT CGATCCTCGC CTCCGATTTC
TCGAAATTGG GCGAAGAGGT CCGCGCGGTC GATCAGGCCG GCTGCGACTG GATCCATCTC
GACGTGATGG ACGGGCATTT CGTGCCGAAC ATTTCCTACG GCCCCGACGT CATCAAGGCG
ATGCGGCCGC ACACCAAAAA GGTGTTCGAC GCGCATCTGA TGATCGCGCC GTGCGATCCG
TTCCTCGAGG CCTTCGCCAA GGCCGGCTGC GACATCATCA CCGTGCACGC CGAGGCCGGC
CCGCATCTGC ATCGCTCGCT GCAGGCGATC CGCGCGCTCG GCAAGAAGGC CGGCGTCTCG
CTCAATCCGG GAACGCATCC GAGCGCGATC GAATACGTGC TCGATGACAT CGACCTGGTG
CTGGTGATGT CGGTCAATCC GGGCTTCGGC GGCCAGGCCT TCATTCCGTC GGCGGTCGAG
AAGATCCGCC AGGTCCGCGC AATGGTCGCC GGCCGGCCGA TCGACATCGA GGTCGATGGC
GGCGTCTCCG ACAAGGTCGC CGGCCAGCTC GCCGCCGCCG GCGCCAACGC CTTCGTCGCC
GGCTCCGCCG TGTTCAAGGG CGGCACGGTG GAGAGCTACA AGGCGAATAT CAGCGGGATT
CGCAATGCGG CAGCGCTGGC GAGAGGCGAA GCCGCGTAA
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| Protein sequence | MTQLAPRPLV IAPSILASDF SKLGEEVRAV DQAGCDWIHL DVMDGHFVPN ISYGPDVIKA
MRPHTKKVFD AHLMIAPCDP FLEAFAKAGC DIITVHAEAG PHLHRSLQAI RALGKKAGVS
LNPGTHPSAI EYVLDDIDLV LVMSVNPGFG GQAFIPSAVE KIRQVRAMVA GRPIDIEVDG
GVSDKVAGQL AAAGANAFVA GSAVFKGGTV ESYKANISGI RNAAALARGE AA
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