Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1768 |
Symbol | |
ID | 4022250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1983316 |
End bp | 1984116 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637961962 |
Product | glutamate racemase |
Protein accession | YP_568905 |
Protein GI | 91976246 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.454909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.641778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCTCGC ATCCGAACAT CCTGGTCTTC GATTCCGGCC TCGGCGGGCT GACGGTGCTG CGCGAGATCG TCAAGGCGCG GCCGGATGCG CACGTCACCT ATGCGGCCGA CGATGCGTTC TTTCCCTATG GCCAGCACAG CGAAGAGGCG CTGGTCGGCC GGGTGGTGCC GCTGATCGGC GAGCTGATCG ACGCCCACAC CCCCGCCCTC GTGGTGATCG CCTGCAACAC CGCCTCGACG CTGGTGCTGT CGCATCTGCG CGCCGCCTAC AGCGTGCCGT TCGTCGGCAC CGTGCCGGCG ATCAAGCCGG CCTGCGCGGC GTCGAAGACC AAGCGCGTCT CGGTGCTCGG CACCAGCGGC ACGGTGAAGC GCGAATACAC CCGCGCGCTG ATCCGCGATT TCGCCGGCGG CTGCGACGTC ACGCTGGTCG GCTCCGCGCA TCTGGCCGCG CTCGCCGAAG CCGCGCTCGG CGGCGCGGAT GTCGCCGACG AGGCGATCCG CGCCGAGATC GCGCCCTGTT TCGTCGACGC CGACGGCAGC CGCACCGACA CCATCGTGCT CGCCTGCACA CACTACCCGC TCTTGCTCGA CCGGCTGATG CGGCTGGCGC CCTGGCCGGT GGACTGGATC GATCCGGCGC CGGCGATCGC CCGCCGGGTG GTCACCCTGC TCGGCCCCGG CTCCGGCCAA AGTGATCATC AAAGTGACCA TCCCGGCGCC GAGATGGTAT TCACATCCGG GCGACCGCCA CGCTTCACGG CAGCGCTCGC GCCCTATTTC GGCGGCCGGG TTCCGGCCTG A
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Protein sequence | MGSHPNILVF DSGLGGLTVL REIVKARPDA HVTYAADDAF FPYGQHSEEA LVGRVVPLIG ELIDAHTPAL VVIACNTAST LVLSHLRAAY SVPFVGTVPA IKPACAASKT KRVSVLGTSG TVKREYTRAL IRDFAGGCDV TLVGSAHLAA LAEAALGGAD VADEAIRAEI APCFVDADGS RTDTIVLACT HYPLLLDRLM RLAPWPVDWI DPAPAIARRV VTLLGPGSGQ SDHQSDHPGA EMVFTSGRPP RFTAALAPYF GGRVPA
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