Gene RPD_1766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1766 
Symbol 
ID4022248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1982089 
End bp1982871 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content69% 
IMG OID637961960 
Producthypothetical protein 
Protein accessionYP_568903 
Protein GI91976244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.725326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.415202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGGCG CCATTCGACC CATCTCGCTG CGGCGACGGC TGATCGCCGA TCTGATGCGC 
GCCTCCGAGG GCGTGCCGCT GATCACCTAT CAACGCACGC TCGATCTGAC GCCGCTGGCG
CAGGCGCGCG CCCGGCTGCC ATCGCCGCCC GGCTTCGCCG CGATCATCGC CAAAGCCTTC
GCGCTGGTGG CGCGCGAGCA GCCGGTGCTG CGCACGCTGG TGGTCGATTT CCCGTGGCCG
CATTTCTACG AACTGCCGCG CAGCGTCGGC GCGATCGCGA TCGCCCGCGA GATCGACGGC
GAGGACTGCG TGCTGATCCA GAAACTGGTG GCGCCCGACG AACTGGCGCT GACCGGCGTC
GATGCATTGA TCCGCGAGGC GCAGACCTCC CCGATCAACG AGGTGCCGAT GTTCCGCAAG
CTGCTGCGGA TCAGCGCGCT GCCCTGGCCG CTGCGGCGGA TCGCCTGGTG GAGCGGGCTG
TCGCTGGCCC GCCAGCGCGC CAATTATTTC GGCAGTTTCG GCCTGTCCTC GGTGTCGGCG
ATCGGCCCCG GCAACCTCTA CCCGACCAGC CCCGGCCCCT ATATTCTGAG CTACGGCCGG
CTCGGCGACG ACGGCCGGCT CGACATGGTG ATCCGATTCG ACCACCGCCT GATCGACGCC
GCCCCGATCG CCCGAATCAT GACCCGGCTC GAACAGGTCC TGAACACCGC CATTGCGGGC
GAACTACAGG CGATGCACAG CCCCTCTACC GGCCACCCGC CGGTGCGTGC GGTGGGGATT
TGA
 
Protein sequence
MRGAIRPISL RRRLIADLMR ASEGVPLITY QRTLDLTPLA QARARLPSPP GFAAIIAKAF 
ALVAREQPVL RTLVVDFPWP HFYELPRSVG AIAIAREIDG EDCVLIQKLV APDELALTGV
DALIREAQTS PINEVPMFRK LLRISALPWP LRRIAWWSGL SLARQRANYF GSFGLSSVSA
IGPGNLYPTS PGPYILSYGR LGDDGRLDMV IRFDHRLIDA APIARIMTRL EQVLNTAIAG
ELQAMHSPST GHPPVRAVGI