Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1762 |
Symbol | |
ID | 4022244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1977887 |
End bp | 1979182 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961956 |
Product | beta-lactamase |
Protein accession | YP_568899 |
Protein GI | 91976240 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.178293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.700473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTTGC GTCGCGCCGC GCGAACGCTG TTTGCAGGAG CGCTGATCGC GCTGGCCGTC AGTCAAGCGC CAAACTCCGC TCTCGCTGAA GGTACGTTCG ACCTGCCGTC CGGCGCGCAA TTCTCGCCAA GCAAGCTCGA ACGCATCGAC GCGTTCTTCA AGACCATCAT CGCCGAAGGC AAGATCCCCG GCGCGTTGGT GTATATCGAG CAGCGCGGCA AGCCGATCTA TCATAAGCAT TTCGGCGTGC GCGACGTCGC CACGCAAGCG CCGGTGACGG ACGACACCAT CTTCCGGCTG GCGTCGCTGA CGAAGCCGTT CACCTCATTC GCGGTGATGA TGCTGGTCGA CGACGGCAAG CTGAAGCTCG ACGATCCGGT GTCGAAATAC ATTCCGGCGT TCGCCGACGT CAAAGTCGGT GTCGAGAAGA AGCGTGACGA CGGCGAGAAG TATCTCGACT TCGAGCCGGT GAAGCGGCCG ATCAAGGTCA GTGATCTGCT GCTGCACACA TCCGGCATCA CTTACGGTTT CTACGGCGAC ACTCTGGTGC GCAAGGCGAT CGCGGCCGCC AAGATCTACG ACGGCGATCC GAGCAACGCC GAATTCGCCG AGCGGATCGC CAAGCTGCCG CTGCAGGAGC AGCCCGGCAC GCTGTGGGAC TACGGCAATT CCTACGAGGT GCTCAGCCGC GTCGTCGAGG TGGCGTCCGG CAAGTCGTTT TATACGTATC AGAAGGAAAG ATTGTTCGAC CCGCTCGGCA TGAAGGACAC GCGCTACTAT CTGTCCACGG ACGAACAGAA GGCGCGGATG GCGCAGCCGA TGCCGAACGA CGCCGACTTC CGCGTCGGGC GCCCGAGCCG GCCGGACATC GTCAAGAAAT GGGAATCCGG CGGCGGCGGC CTGACCTCGA CGCCGTCCGA CGTCATCCGC TTCGTGCGGA TGCTGCTTCA CAAGGGCGAA CTCGACGGCA AGCGCTATTT GAGCGAAGCC GGTTTCAAGG AGATGACCAC CGATCAGATC GGGCCCGGCT CCGGCATCGC GCGTGATCAC TTCTATTTCC CCGGCGACGG TTTCGGCTAC GGCTACGGCC TCGGCGTCCG CACCGATCCC GGCAATGCCA AGCCGCCGCC GCCCGGCTCA ATCGGCGAAT TGAAATGGGA CGGCGCCAGC GGTTGTTACT TCGTGGTCGA TCCGAAGCAG GAGATGTTCT TCGTGCTGAT GGAGCAGACC CCGTCACAGC GCCAGCCGAT CCAGCGCGAA CTCAAGAAGC TGGTCTACGA GGCGATGGAA AACTGA
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Protein sequence | MMLRRAARTL FAGALIALAV SQAPNSALAE GTFDLPSGAQ FSPSKLERID AFFKTIIAEG KIPGALVYIE QRGKPIYHKH FGVRDVATQA PVTDDTIFRL ASLTKPFTSF AVMMLVDDGK LKLDDPVSKY IPAFADVKVG VEKKRDDGEK YLDFEPVKRP IKVSDLLLHT SGITYGFYGD TLVRKAIAAA KIYDGDPSNA EFAERIAKLP LQEQPGTLWD YGNSYEVLSR VVEVASGKSF YTYQKERLFD PLGMKDTRYY LSTDEQKARM AQPMPNDADF RVGRPSRPDI VKKWESGGGG LTSTPSDVIR FVRMLLHKGE LDGKRYLSEA GFKEMTTDQI GPGSGIARDH FYFPGDGFGY GYGLGVRTDP GNAKPPPPGS IGELKWDGAS GCYFVVDPKQ EMFFVLMEQT PSQRQPIQRE LKKLVYEAME N
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