| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1747 |
|---|
| Symbol | |
|---|
| ID | 4022229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 1963587 |
|---|
| End bp | 1964354 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637961941 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_568884 |
|---|
| Protein GI | 162138290 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGC GACGTCGCAT TTATGAAGGC AAGGCCAAGG TGCTGTATGA AGGCCCCGAG
CCCGGAACGC TGATTCAGCA CTTCAAGGAT GACGCCACCG CGTTCAACGC CAAGAAGCAT
CAGGTGATCG AGGGCAAGGG CGTCCTCAAC AACCGGATCT CGGAGTACCT GTTCCAGCAC
CTCAACGATA TCGGGGTGCC GACCCACTTC ATCCGCCGGC TCAACATGCG CGAGCAGTTG
ATTCGCGAGG TCGAGATCGT GCCGCTCGAG GTGGTGGTGC GGAACGTCGC GGCCGGTTCG
CTGTCGCAGC GGCTGGGGAT CGAGGAGGGC ACGCAGCTGC CGCGCTCGAT CATCGAGTTC
TATTACAAGA ACGACCAGCT CAACGACCCG ATGGTCTCGG AAGAGCACAT CACCGCCTTT
GGCTGGGCGA CCCCGCAGGA AATCGACGAC ATCATGGCGC TGGCCATCCG CGTCAATGAT
TTCCTCACCG GACTGTTCCT CGGCATCGGC ATCCGCCTGG TCGACTTCAA GATGGAATGC
GGCCGGCTGT TCGAAAACGA GATGATGCGG ATCATCGTCG CCGACGAGAT CTCGCCCGAC
TCGTGCCGGC TGTGGGACAT CAAGTCGAAC GAGAAGCTCG ACAAGGACCG CTTCCGCCGC
GACCTCGGCG GCCTCCTGGA GGCCTATACC GAAGTCGCCA AGCGGCTCGG CATCCTGATG
GAAAACGAGC GCCCGGTCGG CTCCGGCCCG GTGTTGGTGA AGGGCTGA
|
|---|
| Protein sequence | MSRRRRIYEG KAKVLYEGPE PGTLIQHFKD DATAFNAKKH QVIEGKGVLN NRISEYLFQH
LNDIGVPTHF IRRLNMREQL IREVEIVPLE VVVRNVAAGS LSQRLGIEEG TQLPRSIIEF
YYKNDQLNDP MVSEEHITAF GWATPQEIDD IMALAIRVND FLTGLFLGIG IRLVDFKMEC
GRLFENEMMR IIVADEISPD SCRLWDIKSN EKLDKDRFRR DLGGLLEAYT EVAKRLGILM
ENERPVGSGP VLVKG
|
|---|
| |