Gene RPD_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1742 
Symbol 
ID4022224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1960038 
End bp1960793 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content55% 
IMG OID637961936 
Productcyclic nucleotide-binding 
Protein accessionYP_568879 
Protein GI91976220 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCAAAT TTGACCTTTG CCAACTGATA TTTTTCTGGA TGGTCCCGGC AAAGACGACA 
GCAATATACG AGACGGGCAA TATGACGAAA CCATTCGATG CGATCGCGTT TCTCGAGAAG
GTCGGCGAAG GACGATCGAT CTCGAAATTC AAGAAGAATG ACAACATTTT CGTGCAGGGA
GACGAGGCAA GTTCAGTTTT CTATATTCAG TCGGGCGCGG TGAAGCTCAA CGTCGTTTCG
GAGCAAGGCA AAGAGGCGGT GATCGCCATC ATCGAAGCCG GACATTTTCT CGGAGAGGCC
TGTCTCAGCG GCCATTTCGT GCGCACGGCG ACGGCGTCCG CCATGACGGA CACTGTTCTG
ACATCGATCA CGAAGACCGC GATGCTTGCC GCGCTCGAAC GAGAGCCGAA GCTCGCCGAA
ATGTTCTTGA GGCATGTTCT TGCGCGCAGT CGGCGCATCG AGGAAGACCT GATCGATCAG
CTGTTCAATT CGAGCGAGCG CCGTCTCGCG CGCACGCTGT TGCTGTTGGC GAACTTCGGC
AAACCCGGGC ATCCGCAGCC GATCAGCGTC GAGATCAGCC AGGCAACCCT CGCGGAAATG
ATCGGCACGA CGCGCTCGCG GGTCAGCTAT TTCATGAACA AGTTCAGAAG GCTCGGTTTC
ATCAGCTACA ATGGGAAAAT CCACGTTCAC AGCTCGCTGC TGAACGCGGT GTTGCACGAG
AAACCGGGAG ACAAGAACGA GGACGATGTG GTGTGA
 
Protein sequence
MVKFDLCQLI FFWMVPAKTT AIYETGNMTK PFDAIAFLEK VGEGRSISKF KKNDNIFVQG 
DEASSVFYIQ SGAVKLNVVS EQGKEAVIAI IEAGHFLGEA CLSGHFVRTA TASAMTDTVL
TSITKTAMLA ALEREPKLAE MFLRHVLARS RRIEEDLIDQ LFNSSERRLA RTLLLLANFG
KPGHPQPISV EISQATLAEM IGTTRSRVSY FMNKFRRLGF ISYNGKIHVH SSLLNAVLHE
KPGDKNEDDV V