| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1737 |
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| Symbol | |
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| ID | 4022219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 1953739 |
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| End bp | 1954962 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637961931 |
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| Product | isocitrate dehydrogenase |
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| Protein accession | YP_568874 |
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| Protein GI | 91976215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.691763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAA TCAAGGTGAC CAACCCCGTC GTGGAACTCG ACGGCGACGA GATGACCCGG
ATCATCTGGC AGATGATCAA GGACAAGCTG ATCACGCCGT TCCTTGATGT CGAGCTGATG
TATTTCGATC TGGGCATGGA GCACCGCGAC AAGACCGACG ATCAGGTCAC CATCGACGCG
GCAAATGCGA TCAAGCAGGT CGGCGTCGGC GTCAAATGCG CCACCATCAC CCCGGACGAA
GCGCGGGTGA AGGAATTCGG CCTGAAGAGC ATGTGGAAGT CGCCGAACGG CACGATCCGC
AACATCCTCG GCGGCGTGAT CTTCCGTGAG CCGATCATCT GCAAGAACGT GCCGCGGCTG
GTGCCGGGCT GGACCAAGCC GATCGTGATC GGCCGCCACG CCTATGGCGA CCAGTATCGC
GCGACCGACA TCAAGTTCCC CGGCCCCGGC ACGCTGACGA TGAAGTTCGT CGGCGAGGAC
GGCTCCGTGA TCGAGCGCGA AGTGTTCAAG GCGCCCGGCG CCGGCGTCGC GATGTCGATG
TACAACCTCG ACGAATCGAT CAAGGATTTC GCCCGCGCCT CGCTGAACTA CGGCCTGATC
CGCAACTACC CGGTCTATCT GTCGACCAAG AACACCATCA TGAAAGTCTA TGATGGGCGC
TTCAAGGACA TCTTCCAGGA GATCTTCGAC GCCGAGTTCA AGGCCGAATA CGATTCCAAG
GGCCTGACCT ACGAGCACCG CCTGATCGAC GACATGGTCG CCTCGGCGCT GAAATGGTCG
GGCGGCTACG TCTGGGCCTG CAAGAACTAC GACGGCGACG TGCAGTCCGA CACCGTGGCG
CAGGGCTACG GCTCGCTCGG CCTGATGACC TCGGTGCTGA TGACGCCCGA CGGCAAGACC
GTCGAGGCCG AAGCCGCCCA CGGCACCGTC ACCCGGCACT ATCGCGAACA CCAGAAGGGC
AAGGCGACCT CGACCAATTC GATCGCCTCG ATCTTCGCCT GGACCCGCGG CCTCGCGCAT
CGCGCCAAGC TCGACAGCAA CGAGGAGCTG GCCCGCTTCG CCGACATGCT GGAGAGGGTC
TGCGTCGAGA CCGTCGAAGC CGGCGCAATG ACCAAGGACC TCGCGCTGCT GGTCGGCGCC
GACCAGCGCT GGCTGTCGAC CGAGGGCTTC CTCGACAAGG TCGCGCAGAA TCTCCACAAG
GCGATCAACG AACCCGCCGC CTGA
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| Protein sequence | MAKIKVTNPV VELDGDEMTR IIWQMIKDKL ITPFLDVELM YFDLGMEHRD KTDDQVTIDA
ANAIKQVGVG VKCATITPDE ARVKEFGLKS MWKSPNGTIR NILGGVIFRE PIICKNVPRL
VPGWTKPIVI GRHAYGDQYR ATDIKFPGPG TLTMKFVGED GSVIEREVFK APGAGVAMSM
YNLDESIKDF ARASLNYGLI RNYPVYLSTK NTIMKVYDGR FKDIFQEIFD AEFKAEYDSK
GLTYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGYGSLGLMT SVLMTPDGKT
VEAEAAHGTV TRHYREHQKG KATSTNSIAS IFAWTRGLAH RAKLDSNEEL ARFADMLERV
CVETVEAGAM TKDLALLVGA DQRWLSTEGF LDKVAQNLHK AINEPAA
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