Gene RPD_1736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1736 
Symbol 
ID4022218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1951924 
End bp1953594 
Gene Length1671 bp 
Protein Length556 aa 
Translation table11 
GC content66% 
IMG OID637961930 
Productpotassium efflux system protein 
Protein accessionYP_568873 
Protein GI91976214 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4651] Kef-type K+ transport system, predicted NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACA CACCTTTGAT TTCGACAATC GTGGCCGGCC TCGTGCTGGC CTTTATTTTC 
GGTGTCGTGG CGCAGCGGCT GCGGATATCG CCGCTGGTGG GTTATCTGCT CGCTGGCGTG
GTGATCGGGC CGTTCACGCC GGGCTATGTC GCCAATCAGA ATATCGCCAA TGAACTTGCC
GAGATCGGCA TCATTCTTCT GATGTTCGGC GTCGGCCTGC ATTTTTCTCT GAAGGACCTG
TTGTCGGTGA AGGCGATCGC CATCCCCGGC GCGGTGGTGC AGATCGCCAC AGCGACCGCG
CTCGGCATCG GGCTCGGCCA CGTGCTCGGC TGGTCGTTCG GCAGCGGCCT CGTGTTCGGT
CTGGCGCTGT CGGTGGCGAG CACGGTGGTG CTGCTGCGCG CCTTGCAGGA ACGCCGGCTG
GTCGACAGCG ATCGCGGCCG GATCGCGGTC GGCTGGCTGA TCGTCGAGGA CCTCGCGATG
GTTCTGACGC TGGTGTTGCT GCCGGCGGTG GCCGGCCTGC TCAAGGGCGA CTCCACCGGC
GCGAGCTGGG ACACGGTCGC GCTGCCGATC GCTTTGACGC TCGGCAAGGT CGCCGCCTTC
ATCGCGTTCA TGCTGCTGGT CGGGCGCCGC GTGATCCCGT GGATGCTGCA CTACGTGGCG
CACACCGGCT CGCGCGAACT GTTCCGGCTG GCGGTGCTCT CGATCTCGCT CGGGGTGGCA
TTCGGGGCCG CGATCCTGTT CGACGTGTCG TTCGCGCTCG GCGCATTCTT CGCCGGCATG
ATCCTGTCGG AATCCGAACT CAGCCAGCGC GCCGCCAGCG AGACGCTGCC GTTGCGCGAC
GCCTTCGCGG TGTTGTTCTT CGTGTCGGTC GGCATGCTGG TCGATCCGAT CATTCTGATC
CGGGAGCCTC TGCCGGTGCT CGCCACCGTG CTGATCATCG TATTCGGCAA GTCGCTTGCG
GCGTTTCTGA TCGTGCGGTT GTTCGGTCAT CCGAACATGA CCGCGCTGAC GATCTCGGCC
AGTCTCGCGC AGATCGGCGA ATTCTCCTTC ATCCTCGCCA GCCTCGGCGT CAGCCTCGCT
TTGCTGCCGG AGCGCGGTCG TGATCTGGTG CTGGCGGGTG CGATCATCTC GATCCTGCTC
AATCCGCTGA TGTTCGCGCT GCTGGATCGT TTCAGTGCAC GTAGCGGGGC GGCGCCCGAG
CCGGAGGCCC TGGCGAAGGA GACCGCCGGC GCACACGCAA AGCCGGTGCA TCATGGCGGC
CACGTCGTGC TGGTCGGCTA CGGCCGCGTC GGCTCGATCG TCGGCGCCGC GCTGCGCCGC
GACGGCGCCG ACGTCGTGGT GATCGAGGAC GATACCGAGC GGGTAGCGCA GCTCCAGCGT
GAAGGCATTA CCGCGGTCGG CGGCAACGCC GCCGCGCCGG ACATGCTGGA AGCCGCCGAA
ATCGCCAGCG CACGCGGCCT TCTGGTCGCG ATTCCGGATG CGTTCGAGGG CGGTCAGATC
GTCGCCAAGG CGCGCGCGCT GAACGCCAAG CTGCCGATCA TCGCCCGCGC CCATTCGACC
GAAGAGGTCG CGCATCTGAA GTCGAACGGC GCCGACGTCG TGATCATGGG CGAGGACGAG
ATCGCCAGGG CGATGATCGC GCGGATCGGC GCCGAGCCAG CCTCTTCCTG A
 
Protein sequence
MHNTPLISTI VAGLVLAFIF GVVAQRLRIS PLVGYLLAGV VIGPFTPGYV ANQNIANELA 
EIGIILLMFG VGLHFSLKDL LSVKAIAIPG AVVQIATATA LGIGLGHVLG WSFGSGLVFG
LALSVASTVV LLRALQERRL VDSDRGRIAV GWLIVEDLAM VLTLVLLPAV AGLLKGDSTG
ASWDTVALPI ALTLGKVAAF IAFMLLVGRR VIPWMLHYVA HTGSRELFRL AVLSISLGVA
FGAAILFDVS FALGAFFAGM ILSESELSQR AASETLPLRD AFAVLFFVSV GMLVDPIILI
REPLPVLATV LIIVFGKSLA AFLIVRLFGH PNMTALTISA SLAQIGEFSF ILASLGVSLA
LLPERGRDLV LAGAIISILL NPLMFALLDR FSARSGAAPE PEALAKETAG AHAKPVHHGG
HVVLVGYGRV GSIVGAALRR DGADVVVIED DTERVAQLQR EGITAVGGNA AAPDMLEAAE
IASARGLLVA IPDAFEGGQI VAKARALNAK LPIIARAHST EEVAHLKSNG ADVVIMGEDE
IARAMIARIG AEPASS