| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1734 |
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| Symbol | alaS |
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| ID | 4022216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1946851 |
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| End bp | 1949526 |
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| Gene Length | 2676 bp |
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| Protein Length | 891 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637961928 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_568871 |
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| Protein GI | 91976212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG TTAACGAAAT CAGGTCTGCG TTTCTGAACT ACTTTGCGAA AAACGGCCAC
GACATCGTAC CGTCGTCGCC GCTGGTGCCG CGCAACGATC CGACATTGAT GTTCACCAAT
GCGGGCATGG TGCAGTTCAA GAACGTCTTC ACCGGGCTCG AGAAGCGACC GTATCATCGC
GCCACCACTT CGCAGAAATG CGTGCGCGCC GGCGGCAAGC ACAACGACCT CGACAATGTC
GGCTACACCG CGCGGCATCA CACCTTCTTC GAGATGCTCG GCAACTTCTC GTTCGGCGAC
TACTTCAAGG ATCGCGCGAT CGAGCTGGCC TGGAATCTGA TCACCAAGGA ATACGGCCTG
CCGAAGGATC GGCTGCTGGT AACCGTGTAT TCCGAGGACG ACGAGGCGTT CGGCCTGTGG
AAAAAGATCG CAGGGCTGCC GGAGTCGAAG ATCATCCGGA TCCCGACCTC GGATAATTTC
TGGCAGATGG GCGACACCGG TCCGTGCGGC CCGTGCTCGG AAATCTTCTT CGACCACGGC
GACCATATCT TTGGCGGCCC GCCCGGCTCG CTGGAGGAGG ACGGCGATCG CTTCATCGAG
ATCTGGAACC TGGTGTTCAT GCAGTTCGAG CAGGTCGCGC CGGGCAACCG GACGCCGCTG
CCGAAGCCGT CGATCGACAC CGGCATGGGG CTGGAGCGCA TCGCCGCGGT GCTGCAGGGC
AAGCACGACA ATTACGAAAT CGATCTGTTC CAGGCGTTGA TCCGCGCCAT CGCCGAACTC
ACCGGGGCCG ATCCGCAGGG CGAGCAGAAG GGATCGCTGC GGGTGATCGC CGATCATTTG
CGCGCCGCGT CGTTCCTGAT CGCCGACGGC GTGCTGCCGT CGAACGAGGG CCGCGGCTAT
GTGCTGCGCC GGATCATGCG CCGCGCGATG CGCCACGGGC AGTTGCTCGG CGCGCGCGAG
CCGCTGATGT GGCGGCTGGT GTGGGCGCTG GTGCGCGAGA TGGGCCAGGC CTATCCCGAG
CTGGTCCGCG CCGAGGCGAT GATCGAGGAG ACGCTGCGGC TGGAAGAGAC CCGCTTCCGC
AAGACGCTGG AGCGCGGTCT GACCATCCTC GACGAAAAGA GCGGCTCGCT GAAGAAGGGC
GACATGTTCG ACGGCGACAC CGCGTTCACG CTGTACGACA CCTATGGTTT CCCGCTGGAC
CTGACGCAGG ACGCGCTGCG CAACCGCGGC ATCAGCGTCG ACATCGCCTC GTTCACCGAC
GCGATGGATC GGCAGCGCGC CAAGGCGCGG GCGTCGTGGG CGGGAAGCGG CGAGGCCGCG
ACCGAAACCG TCTGGTTCGG ATTGCGCGAC AAGCTCGGCG CCACCGAATT CCTGGGCTAC
GACACCGAGA CCGCCGAGGG CGTGGTCACC GCCTTGGTCA AGGACGGCAA GGAGGTCGAG
GCGCTGAAGG CCGGCGATGC CGGCGCGATC GTGCTGAACC AGACGCCGTT TTACGCCGAG
TCCGGCGGCC AGGTCGGCGA CACCGGGGTG TTGACCGGCG AGGGCGTCCG CTTCCGAGTC
ACCGACACGT TGAAGAAGGC CGGCGATTTG TTCGTGCATT TCGGCACGGT GGAAGAGGGT
ACGGTCAAGC CCGAGGCCGC GCTGGCGCTC GAGGTCGATC ACTCCCGTCG TTCATCGATC
CGCGCCAATC ACTCGGCGAC GCATCTGTTG CACGAGGCGC TGCGCCAGGT GCTGGGCGAT
CATATCGCGC AGAAGGGCTC GATGGTCGCG CCTGACCGGC TGCGGTTCGA CTTCGTGCAT
CAGAAGCCCA TCACGCAGGA CGAACTCCGC CGCGTCGAGG ACATCGCCAA CGACATCGTG
CTCGAAAACG ACGAGGTGAC GACGCGGCTG ATGGCGGTCG ACGACGCCCG TGAGGCCGGC
GCCCGCGCGC TTTTCGGCGA GAAATACGGC GACGAGGTTC GCGTCGTGTC GATGGGCAAG
GCGTCGCGCG AGCACGGCTC CAACGCGTTC GGCTGGTCGG TCGAATTGTG CGGCGGCACC
CATGTGCGGC GCACCGGCGA CATCGGCCTG ATCTCGGTGA CCGGCGAAAG CGCGGTCGCC
TCCGGCGTGC GCCGGATCGA AGCGCTGACC GGGCGACATG CGCGGCAAAG CGCCAACGCC
GCAATGGCGA CCGCGAAAGC CGCCGCCGCC GAGCTGCGCA CCACGCTCGA CGACATGCCG
GCGCGGATCG CCTCGCTGAT GGACGAGCGC AAGAAGCTCG AGCGCGAACT CTCCGACGCC
CGCAAGAAGC TGGCGATGGG CGGCAGTGGC GCTGCCGGCG CGGCCGATGG CGGCGCGGAT
GTGCGCGACG TCGGCGGCGT CAAGCTGTTG GCGCGCGCGG TCGAGGGCAT CGAGATCAAG
GACCTCAAGA GCCTGGTCGA TCAGGGCAAG AAGCAGCTCG GCTCCGGCGT GATCGCGCTG
GTGGCGAAGA GCGAGGACGG CAAGGGCTCG ATCGTCGTCG GCGTCACGCC CGATCTGGTG
GCGCGATTCT CGGCGGTCGA TCTGGTCCGC AAGGCGTCCG AAGTGCTCGG CGGCAAGGGC
GGCGGCGGCA AGCCCGACAT GGCGCAGGCC GGCGGCCCCG ACGGCTCCAA GGCGCAGGCC
GCACTCGACG CCATCGCCGC GGCGATCGGC GGATAG
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| Protein sequence | MSGVNEIRSA FLNYFAKNGH DIVPSSPLVP RNDPTLMFTN AGMVQFKNVF TGLEKRPYHR
ATTSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKDRAIELA WNLITKEYGL
PKDRLLVTVY SEDDEAFGLW KKIAGLPESK IIRIPTSDNF WQMGDTGPCG PCSEIFFDHG
DHIFGGPPGS LEEDGDRFIE IWNLVFMQFE QVAPGNRTPL PKPSIDTGMG LERIAAVLQG
KHDNYEIDLF QALIRAIAEL TGADPQGEQK GSLRVIADHL RAASFLIADG VLPSNEGRGY
VLRRIMRRAM RHGQLLGARE PLMWRLVWAL VREMGQAYPE LVRAEAMIEE TLRLEETRFR
KTLERGLTIL DEKSGSLKKG DMFDGDTAFT LYDTYGFPLD LTQDALRNRG ISVDIASFTD
AMDRQRAKAR ASWAGSGEAA TETVWFGLRD KLGATEFLGY DTETAEGVVT ALVKDGKEVE
ALKAGDAGAI VLNQTPFYAE SGGQVGDTGV LTGEGVRFRV TDTLKKAGDL FVHFGTVEEG
TVKPEAALAL EVDHSRRSSI RANHSATHLL HEALRQVLGD HIAQKGSMVA PDRLRFDFVH
QKPITQDELR RVEDIANDIV LENDEVTTRL MAVDDAREAG ARALFGEKYG DEVRVVSMGK
ASREHGSNAF GWSVELCGGT HVRRTGDIGL ISVTGESAVA SGVRRIEALT GRHARQSANA
AMATAKAAAA ELRTTLDDMP ARIASLMDER KKLERELSDA RKKLAMGGSG AAGAADGGAD
VRDVGGVKLL ARAVEGIEIK DLKSLVDQGK KQLGSGVIAL VAKSEDGKGS IVVGVTPDLV
ARFSAVDLVR KASEVLGGKG GGGKPDMAQA GGPDGSKAQA ALDAIAAAIG G
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