Gene RPD_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1721 
Symbol 
ID4022201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1934541 
End bp1935005 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content69% 
IMG OID637961915 
Productthioesterase superfamily protein 
Protein accessionYP_568858 
Protein GI91976199 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.462617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGA GCGGGACAAC CACGGATTTT GGCCTCGACG ACGCGAGGCG CACGCTCAGC 
GATGTTTTCG CGCCCTGGGT GCTCGATCTC GGCCTGACGG TGGATGCGAT CGAGACCGCG
CCGCCGCCCG GTGCTGGCGG CGACTGGCAG CCCGGCGCGA CGCTGCGAAT GGGGTTCTCG
GATCGGCTCT GCCGCAGCGG CGGCATCGTC TGCGGACAGG CGCTGATGGC TCTCGCCGAC
ACCGCGATGG TGATCGCGAT CCTGGCCGCC AATCGCGGCT TCAGGCCGAT GACCACGGTC
GATCAGACCA CACATTTTCT GAAAGCGGTC GCCTCGTCCG ACGTGCTGGC GGACGCGCGG
GTGGTGCGGC TCGGGCGCAC CATGAGCTTT GGCCGGGTGA CGCTGCTGAG CGCCGCCGAT
GGCAAGCCGG TGGCGATGGT GTCGAGCGCG TTCGCGATGC TTTGA
 
Protein sequence
MPESGTTTDF GLDDARRTLS DVFAPWVLDL GLTVDAIETA PPPGAGGDWQ PGATLRMGFS 
DRLCRSGGIV CGQALMALAD TAMVIAILAA NRGFRPMTTV DQTTHFLKAV ASSDVLADAR
VVRLGRTMSF GRVTLLSAAD GKPVAMVSSA FAML