Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1721 |
Symbol | |
ID | 4022201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 1934541 |
End bp | 1935005 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637961915 |
Product | thioesterase superfamily protein |
Protein accession | YP_568858 |
Protein GI | 91976199 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.462617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGAGA GCGGGACAAC CACGGATTTT GGCCTCGACG ACGCGAGGCG CACGCTCAGC GATGTTTTCG CGCCCTGGGT GCTCGATCTC GGCCTGACGG TGGATGCGAT CGAGACCGCG CCGCCGCCCG GTGCTGGCGG CGACTGGCAG CCCGGCGCGA CGCTGCGAAT GGGGTTCTCG GATCGGCTCT GCCGCAGCGG CGGCATCGTC TGCGGACAGG CGCTGATGGC TCTCGCCGAC ACCGCGATGG TGATCGCGAT CCTGGCCGCC AATCGCGGCT TCAGGCCGAT GACCACGGTC GATCAGACCA CACATTTTCT GAAAGCGGTC GCCTCGTCCG ACGTGCTGGC GGACGCGCGG GTGGTGCGGC TCGGGCGCAC CATGAGCTTT GGCCGGGTGA CGCTGCTGAG CGCCGCCGAT GGCAAGCCGG TGGCGATGGT GTCGAGCGCG TTCGCGATGC TTTGA
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Protein sequence | MPESGTTTDF GLDDARRTLS DVFAPWVLDL GLTVDAIETA PPPGAGGDWQ PGATLRMGFS DRLCRSGGIV CGQALMALAD TAMVIAILAA NRGFRPMTTV DQTTHFLKAV ASSDVLADAR VVRLGRTMSF GRVTLLSAAD GKPVAMVSSA FAML
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