Gene RPD_1717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1717 
Symbol 
ID4022197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1930484 
End bp1931149 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID637961911 
ProductDSBA oxidoreductase 
Protein accessionYP_568854 
Protein GI91976195 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCAGGCCGTT GAAGATCGAT GTCGTGTCCG ATGTCGTCTG CCCGTGGTGC 
TACATCGGCA AGCGCCGCAT CGAGCAGGCG CTGGCGCTCG CCCCCGATGT GCCGGTCGAG
CTCAACTACC GGCCGTTCTT CCTCAATCCG TGGGTGCCGC GGGAAGGCAT CGAACGCGAC
GAATACCTCA CCAAGAAATT CGGCTCGCCC GAGCGCTACA AGGAGATCGC GGGCCGCGTC
GTCGAGGTCG CCGCGCAGGA AGGGCTCGAC TATCATCCGG ACCGCGTGCA GCGGCAGCCG
AACACGATCG ACTGCCATCG GCTGATCCAT TGGGCCGAGG CGATCGGTCA GGGGCCCGCG
ATGAAGCAGC GGTTGATGGA ATTGTATTTC CGCGACGGCG GCGATCTCAC CGACACCGAG
GTGCTGGTGC AGGCCGCGGC CGATGTCGGC CTCGACGCCG CCGAGGTGAG CGCCAGGCTC
GCGACCGACG CGGATATCGA GCTGATCTCG GGGCAGGCGG AGGAGGCGGC CGAGAAGGGC
ATCTCCGGCG TACCGACCTT CGTGTTCGCG CAGAAATACG CGGTGTCCGG CGCGCAGGAC
CCGGCGCAGC TCGCCAAGGC CATCCGTCAC ATTTCGGCGG AGATCAACGC CGTGGCGGCG
GAGTAA
 
Protein sequence
MSAIRPLKID VVSDVVCPWC YIGKRRIEQA LALAPDVPVE LNYRPFFLNP WVPREGIERD 
EYLTKKFGSP ERYKEIAGRV VEVAAQEGLD YHPDRVQRQP NTIDCHRLIH WAEAIGQGPA
MKQRLMELYF RDGGDLTDTE VLVQAAADVG LDAAEVSARL ATDADIELIS GQAEEAAEKG
ISGVPTFVFA QKYAVSGAQD PAQLAKAIRH ISAEINAVAA E