Gene RPD_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1704 
Symbol 
ID4022184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1919832 
End bp1920191 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content62% 
IMG OID637961898 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_568841 
Protein GI91976182 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGGCC TGAAAGTGTG CACCGGCGGC TGCCATTGCG GCCAGGTGCG GTTCGAATGC 
ACCACCGACC TCGCAACGGT GACGGCGTGC AATTGCTCGA TCTGTACCAA GAAGGGGCTG
CATCTGACCT TCCTGCCGCC CAAGAGCTTT CAGCTGCGCG CCGGCGGTGA GAGCCTGAAG
GAATATCTGT TCAACCAGCG CGCGATCAGC CACCAACTCT GCAGCGAATG CGGCGTCGAA
GTGTTCGCGC GCGGCACCAA GCCCGACGGC AGCGAAATCA TCGCCGTCAA CGTCTCCTGC
ATCGACGGCA TCGATCTCGC GGCGCTGAAG ATGACGCCGA TCGACGGACG CAGCAGGTAG
 
Protein sequence
MTGLKVCTGG CHCGQVRFEC TTDLATVTAC NCSICTKKGL HLTFLPPKSF QLRAGGESLK 
EYLFNQRAIS HQLCSECGVE VFARGTKPDG SEIIAVNVSC IDGIDLAALK MTPIDGRSR