Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1700 |
Symbol | |
ID | 4022180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1914476 |
End bp | 1917028 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637961894 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_568837 |
Protein GI | 91976178 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.99866 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA ACGACCATCA GGCTCCGACG ACCGCTGCGG CGGAGCCGGC GCGCCGCGGC GGCAGCATCG TGCTGGTTCT GCTGGTGGCG GGCGCCATCG TCGCCGCCGC CGTGGCGTTC ATGACGCTCG GGCGCGCCGA TGCGCAGCCC TATATTCTCG GCCTGCTGGC GCTGCTGGCG ATGGTCGGGC TGTTCATGCT GTTCGCCTTC GCCGCCGGCA TCGTCGGCTT CGCCGACCGG GCCGCCGACG ATCCGGTGCT GCGGGCGATC GCCGAAGGCG CGTTCGACGG CATCGCGGTG ACCGATCCGC GCGGGCATGT GGTTTACGCC AACTCGGCCT ATCTGGCCCT GACCGGCGCT GCGACGATGC AGGACGTCCG CCCGGTCGAA CGGGTGTTCA TCGGCAATCC CGACGTCTCC GAGGCGGTAT TCCGCCTGTT GAAGGCGGCG CGCGAGGGCA AGCGGCTGCA GGAGGAGGTC CGGGTCGCCG GCGCCGATGG CGCGCAGGGC CGCTGGATGC GGATGCGGGT GCGTCCGCTC GGACCCGGCA AGCGCGAGGC ACGGCAGACG GTCTGGTCGC TGGCCGACAT CACCCGCGAT CGCGAGCACC AGGAGGACGT GTTCCAGGAG CTGCAGCACG CGATCGAATA TCTCGACCAT GCGCCCTGCG GCTTCTTCTC GGTCAATGCC GACGGCAATC TCGTCTACGT CAACGCCACC CTGGCGAACT GGCTCGACCA CGACCTTGCC GAGATCGGCT CCGGCGGGCT GAAGCTCGGC GACATCGTCT CCGGCGACGG CGCGGCGCTG CTGACCTCGA TCGTGCCCGA GCCGGGTGAG GTGAAAACCG AGGTTTTCGA CATCGATCTG AAGATGCGCA ACGGCAAGAC CATGCCGGTG CGGCTGTATC ACAAGCTCGC CTTCGGCGCC GATGGGGCGC CCGGCGCGTC GCGCACGCTG GTGATCAGCC GCGCCCGCGA CGAGCGGCTC GATCCGCAGC GCGCCGCCGA GATCCGCTTC ATGCGGTTCT TCGACCACAC CCCGATGGCG ATCGCCACAG TGGACAAGTC CGGCGTCGTG GTGCGCGCCA ATGCCCGTTT CGCCAAGCTG GCGCAGAGCC TGGATCCGAC CGGCGCCGCC GCCAAGTCGA TCCTCGCCGC CGTCAACATC CGCGATCGCA ACACCCTCGG CGGCGCGATC GATCAGGCCG CGCAAGGCCA GGCCGACATC GCGCCGGTCG AGGTGATGCT CGACGGCGCC AAGGAGCGCT GGGGCCAGTT CTTCGTCACG GCGGTCGCCG ACGACGGCGA TGCCGAGGCC GCGATCGTCT ATCTGCTCGA GACCACCGAG CGTCGCGCGC TGGAGAACCA GGTCAACCAG GCGCAGAAGA TGGATACCAT CGGCCAACTC GCCGGCGGCA TCGCGCACGA CTTCAACAAC GTGCTCTCGG CCATCATGAT GGCCAACGAC TTCCTGCTGA ACGCGCACAA GCCGACCGAC CCGTCGTTCC AGGACATCAT GCAGATCAAG CAGAACGCCA CCCGCGCCGC GACGCTGGTG CGGCAGCTGC TGGCGTTCTC GCGCAAGCAG ACGCTGCGGC CGCAGGTGCT CGATCTTCGG GAGGCGCTGA CGGATATCGA CCGGCTGTTG AAGCGGCTGA TCGGCGAGAA GGTCACGCTC ACAATGCCGC ACGGTCGGGA TCTGTGGCGG GTGAAGGCCG ACGTCTCGCA GTTCGAACAG GTGATCGTCA ATCTCGCGGT CAATGCGCGC GACGCGATGC CCGATGGCGG CAAGCTGACG ATCCGCACCT GCAACGTGAC CGCAGCGGAC GCCGCGCAGC TCGCCCACAA GGGAATGCCG GCGGCGGACT ATGTGCGCAT CGACGTCAGC GACACCGGCA CCGGGATTCC CGCCGATATC GTCGACAAGA TCTTCGAGCC GTTCTTCTCG ACCAAGGAAG TCGGCAAGGG CACCGGCCTC GGGCTGTCGA CCGTCTACGG CATCATCAAG CAGACCGGCG GCTTCGTGTA TGTCGACTCG GAGCCCGGCA AAGGCACCAC CTTCCAGATC TTCCTGCCGC GCCACGATGC GGTTGAAGTG CAGCCGGAAG CCCCGGTCGT GACCAGCATC GCGGTGTCGA GCGAAGCGGC CGCCGCCGCC AAGCAGCGCG CCGACATGAC CGGGCAGGGC ACCATCCTGC TGGTCGAGGA CGAAGAGGGG CTGCGCTCGC TCAACGCCCG CGGCCTGCGC TCGCGCGGCT ACAACGTGAT CGAGGCCTCC AACGGCATCG AGGCGCTGGA GGCGTTCGAC GAGCATGGCG GCTCGGTCGA TCTCGTGGTA TCGGACGTGG TGATGCCGGA GATGGACGGG CCGTCGCTGT TGAAAGCGAT GCGCGCGCGC AACTCCGACC TCAAGATCAT CTTCGTCTCC GGCTACGCCG AGGACGCCTT CGAGAAAAGC CTGCCGGAGA ATGAACAGTT CGCCTTCCTC GCCAAACCGT TCGCGCTGAG CGCGCTGGTC GCCAAGGTCA AGGAAACGAT GGCGCCGAAC TAA
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Protein sequence | MTINDHQAPT TAAAEPARRG GSIVLVLLVA GAIVAAAVAF MTLGRADAQP YILGLLALLA MVGLFMLFAF AAGIVGFADR AADDPVLRAI AEGAFDGIAV TDPRGHVVYA NSAYLALTGA ATMQDVRPVE RVFIGNPDVS EAVFRLLKAA REGKRLQEEV RVAGADGAQG RWMRMRVRPL GPGKREARQT VWSLADITRD REHQEDVFQE LQHAIEYLDH APCGFFSVNA DGNLVYVNAT LANWLDHDLA EIGSGGLKLG DIVSGDGAAL LTSIVPEPGE VKTEVFDIDL KMRNGKTMPV RLYHKLAFGA DGAPGASRTL VISRARDERL DPQRAAEIRF MRFFDHTPMA IATVDKSGVV VRANARFAKL AQSLDPTGAA AKSILAAVNI RDRNTLGGAI DQAAQGQADI APVEVMLDGA KERWGQFFVT AVADDGDAEA AIVYLLETTE RRALENQVNQ AQKMDTIGQL AGGIAHDFNN VLSAIMMAND FLLNAHKPTD PSFQDIMQIK QNATRAATLV RQLLAFSRKQ TLRPQVLDLR EALTDIDRLL KRLIGEKVTL TMPHGRDLWR VKADVSQFEQ VIVNLAVNAR DAMPDGGKLT IRTCNVTAAD AAQLAHKGMP AADYVRIDVS DTGTGIPADI VDKIFEPFFS TKEVGKGTGL GLSTVYGIIK QTGGFVYVDS EPGKGTTFQI FLPRHDAVEV QPEAPVVTSI AVSSEAAAAA KQRADMTGQG TILLVEDEEG LRSLNARGLR SRGYNVIEAS NGIEALEAFD EHGGSVDLVV SDVVMPEMDG PSLLKAMRAR NSDLKIIFVS GYAEDAFEKS LPENEQFAFL AKPFALSALV AKVKETMAPN
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