Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1698 |
Symbol | flhB |
ID | 4022178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 1912462 |
End bp | 1913535 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637961892 |
Product | flagellar biosynthesis protein FlhB |
Protein accession | YP_568835 |
Protein GI | 91976176 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
TIGRFAM ID | [TIGR00328] flagellar biosynthetic protein FlhB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.736983 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGACG ATAATGACGA AGAGAAACAA CAAGAACCAA CACAAAAGCG CCTCGACGAC GCGCTCAAGC GCGGCGACGT CGCCAAGAGC CAGGAGGTCA ACACCTGGTT CGTGATCGCC GGCGCAACAT TGCTGCTGTC GTCGTTCTCG GGATCGATCG GAACCGGCGT CACCGGTCCG ATGCGCGCGC TGATCGAAAA ATCCTGGATG CTCAAGGTCG ATGGCGCGGG CCTGCTGGCG CTGACCAAGA GCCTGCTGCT GATGCTGGTC TCGGTGCTCG GCGTGCCGCT GTTCCTGTTG ATGCTGGTCG CGATCGGCAG CAATTTGATC CAGCACCGCC TGGTGTTCTC CACCGAAGGG CTGACGCCGA AATTAAGCAA GCTGTCGCCG CTGGAAGGCG CCAAGCGGCT GTTCGGCAAG CAGGCGCTGG CCAATTTTCT CAAGGGCCTT TTCAAGGTGA TCGCGCTCGG CGTGGTGATG GTCGCGGTGC TGTATCCGGA GCGCGACCGG CTCGACGCGC TGCTGCAGAT GGACGTGGTC TCGCTGCTCG GCGTCACCGT CGGGCTGACA TTGAAGCTGA TGGGATCGGT GGCGGCCGTG CTCGCCTTCG TCGCGGCCGG CGATTACTTT TTCCAGTATC GCACCTGGCA CGAGCGGCAA AAGATGTCGC TGCAGGAGGT CAAGGACGAA TACAAGCAAT CGGAAGGCGA TCCGCACATC AAGGGGCGGA TCCGGCAGAT CCGCTATCAG CGGATGAAGA AAAGGATGAT GGCGGCGGTG CCGAGCGCCT CGGTGGTCAT CACCAACCCG ACCCACTTCT CGGTGGCGCT GAAATACGAG CGCGGCATGC AGGCGCCGAT CTGCGTCGCC AAGGGCGCCG ACGCGATCGC GTTCAAGATC AGGGAAGTGG CGAAGGCCAA CAACGTCCCG ATCGTCGAGA ACGTGCCGCT GGCGCGCGCG CTCTACGCCA CCGTCGAGGT CGACGGTGAA ATCCCGATCG AGCACTATCA CGCGGTCGCC GAGGTGATCG GCTATGTCAT GAACCTGAAG CGCGGCTTCA ATAGCCGGAG ATGA
|
Protein sequence | MSDDNDEEKQ QEPTQKRLDD ALKRGDVAKS QEVNTWFVIA GATLLLSSFS GSIGTGVTGP MRALIEKSWM LKVDGAGLLA LTKSLLLMLV SVLGVPLFLL MLVAIGSNLI QHRLVFSTEG LTPKLSKLSP LEGAKRLFGK QALANFLKGL FKVIALGVVM VAVLYPERDR LDALLQMDVV SLLGVTVGLT LKLMGSVAAV LAFVAAGDYF FQYRTWHERQ KMSLQEVKDE YKQSEGDPHI KGRIRQIRYQ RMKKRMMAAV PSASVVITNP THFSVALKYE RGMQAPICVA KGADAIAFKI REVAKANNVP IVENVPLARA LYATVEVDGE IPIEHYHAVA EVIGYVMNLK RGFNSRR
|
| |