Gene RPD_1698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1698 
SymbolflhB 
ID4022178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1912462 
End bp1913535 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content62% 
IMG OID637961892 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_568835 
Protein GI91976176 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.736983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG ATAATGACGA AGAGAAACAA CAAGAACCAA CACAAAAGCG CCTCGACGAC 
GCGCTCAAGC GCGGCGACGT CGCCAAGAGC CAGGAGGTCA ACACCTGGTT CGTGATCGCC
GGCGCAACAT TGCTGCTGTC GTCGTTCTCG GGATCGATCG GAACCGGCGT CACCGGTCCG
ATGCGCGCGC TGATCGAAAA ATCCTGGATG CTCAAGGTCG ATGGCGCGGG CCTGCTGGCG
CTGACCAAGA GCCTGCTGCT GATGCTGGTC TCGGTGCTCG GCGTGCCGCT GTTCCTGTTG
ATGCTGGTCG CGATCGGCAG CAATTTGATC CAGCACCGCC TGGTGTTCTC CACCGAAGGG
CTGACGCCGA AATTAAGCAA GCTGTCGCCG CTGGAAGGCG CCAAGCGGCT GTTCGGCAAG
CAGGCGCTGG CCAATTTTCT CAAGGGCCTT TTCAAGGTGA TCGCGCTCGG CGTGGTGATG
GTCGCGGTGC TGTATCCGGA GCGCGACCGG CTCGACGCGC TGCTGCAGAT GGACGTGGTC
TCGCTGCTCG GCGTCACCGT CGGGCTGACA TTGAAGCTGA TGGGATCGGT GGCGGCCGTG
CTCGCCTTCG TCGCGGCCGG CGATTACTTT TTCCAGTATC GCACCTGGCA CGAGCGGCAA
AAGATGTCGC TGCAGGAGGT CAAGGACGAA TACAAGCAAT CGGAAGGCGA TCCGCACATC
AAGGGGCGGA TCCGGCAGAT CCGCTATCAG CGGATGAAGA AAAGGATGAT GGCGGCGGTG
CCGAGCGCCT CGGTGGTCAT CACCAACCCG ACCCACTTCT CGGTGGCGCT GAAATACGAG
CGCGGCATGC AGGCGCCGAT CTGCGTCGCC AAGGGCGCCG ACGCGATCGC GTTCAAGATC
AGGGAAGTGG CGAAGGCCAA CAACGTCCCG ATCGTCGAGA ACGTGCCGCT GGCGCGCGCG
CTCTACGCCA CCGTCGAGGT CGACGGTGAA ATCCCGATCG AGCACTATCA CGCGGTCGCC
GAGGTGATCG GCTATGTCAT GAACCTGAAG CGCGGCTTCA ATAGCCGGAG ATGA
 
Protein sequence
MSDDNDEEKQ QEPTQKRLDD ALKRGDVAKS QEVNTWFVIA GATLLLSSFS GSIGTGVTGP 
MRALIEKSWM LKVDGAGLLA LTKSLLLMLV SVLGVPLFLL MLVAIGSNLI QHRLVFSTEG
LTPKLSKLSP LEGAKRLFGK QALANFLKGL FKVIALGVVM VAVLYPERDR LDALLQMDVV
SLLGVTVGLT LKLMGSVAAV LAFVAAGDYF FQYRTWHERQ KMSLQEVKDE YKQSEGDPHI
KGRIRQIRYQ RMKKRMMAAV PSASVVITNP THFSVALKYE RGMQAPICVA KGADAIAFKI
REVAKANNVP IVENVPLARA LYATVEVDGE IPIEHYHAVA EVIGYVMNLK RGFNSRR