| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1690 |
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| Symbol | |
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| ID | 4022170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1903925 |
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| End bp | 1907767 |
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| Gene Length | 3843 bp |
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| Protein Length | 1280 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961884 |
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| Product | hypothetical protein |
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| Protein accession | YP_568827 |
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| Protein GI | 91976168 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.16649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0936113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGCGC TGAACCCGGC GCGTGGAACA ATGCGAGAAG GCGGGACGCG GCCCGCTCGG
CAGAACAGGG TCGTTGACCG GAAGACACGG ATGGCGCGGA TGGCTGCCGC TGCAGTTTGG
TCGCAGGCGC TCTGCTGGCG CCTCGCACGA TTCTGTCTGG CGTTAGGGCT CGTTCTCACC
TTCGCGCTTG CAGCGTGGCC GGCGGCCGCG CAAGCGGTGC GCGGCGAAGC CAGCTTCGAT
GCGACCGGCG GCTACGGCCG GCTGTTGCTC AAGCTTGCCG AGGACGTCGA GTCCGACGTC
ACCATGGCCG GACTGATCCT GGTGATCCGC TTCAAACGTC CGGTGGACAT CCCGATCGAC
AAGCTCGCCG ACTCCGCCCC GAACTACATC GGCTCGGCGC GTCTCGACCC CGACGGCTCC
GCGGTGCGGC TTGCGCTGGT CCGCAAGCTC AACGTCAATC CGATGGCGGC GGGCGAGCGG
CTGTACATCG ATTTTCTTCC CGACAATTGG TCGGGCGCGC CGCCCGGCCT GCCGCAGGAC
GTCGTCAAGG CGCTGGCCGA ACGCGCGCGC CTGGCGGAGC GTGCGCTGCG GGCGCAACAG
GCGAGGGCGG ACGTCAAGAA GCGGCCGCCG ATCCGTGTCC GAGCCTCGAT GCAGCCGACC
TTCGTGCGCT ATTTGTTCGA GATCCCGAAC GACGTCCAAG TCTCCTCGAC GCTGACCGAC
AAGAAGCTGA CGGTATCGTT CAACACCGGG CTGAGCTTCG ATCTCGCCGA TGCCCAGCTC
GCCGGTGCTC CGAACGTTGG AGCGATCAGC CAGAGGATCG ACGGCAATGG GTCCAGCGTC
GATTTCCCGC TGATCGGTGG AGCCGACGTG CGCTCGTTCC GCGAGGAGAA GAACTTCGTC
GTCGACGTCG GTTTCCAGCC GCAGGACGGT GAGCCGCTGA AGCGGAACTC GTCGGCGCTG
ACGTTGCCGG AGATCGCCAA GCTCGAACGC AAGCCCGCTG CTCCGGCGCG CGGCGCAGAG
AACGGCAAGG CCGACACCCA CGGTGCCGGC GACGCCGACC ACGCGACGAC GCCGGAAACC
AAACCTGCCG CCAAGCCCCA GGCGCAGGCG GCGCCGCAAT CCGCTGCCGC ACCGCCGAAG
GCCGCCGCGG CAGCGCCGGC GCCCGCTGGC CCTCCGCCGC GCCAGGCCGA GGCAGCAACG
CCGTCCAAAG CCGCTGCGCC GCCTGTTGCG GCGCCTGTCG CGGCCGTGCC CGCGTCCGCC
GCGCCGGCCA CGGCTGGCGC CGAGGCTTCG GCTGCACCCG CCGCCTCGCC CCAGCCAAGC
GCTGGTCCGG TCGTCGCGGA GAACCCGCAA GCGCCGCCAC CCGCTCCGGC CGACGCCGTT
GTCGCAATGC CCGCCGCGGC GTCGAGCGCC GCCCGTGCCG CTGAGGCGCG CCGTTCGACC
GACGGCCTCC AACTCACATT CACCTTCGCG ACGCCGACCC CGGCGGCGCT GTTCCGGCGC
GGCGAAATGA TCTGGCTGGT GTTGGACAAC ACCGCGCCGT TCGATCTCGC CGCGATCCGC
CGCGAAGGCG GCGGCATCGT CGGCGACGTC GCCCGGGTCG CGCTGCCGCA GGGCCAGGCA
GTTCGCATCC GGCTCGATCG CCCGCAACTG GCCGCGCTGA GCGACGAAGA CGGCTCCGGC
AAGAGCTGGT CGATCACGCT GGCCGATTCC GGTCGCGGCG CGTCGCGTCC GCTGACCGCC
GTGCGCAACA TCGCCGATCC CGCCCGCTCC ACCGTCACTG TCGCGCTCAA CGGGCTCGGC
CAGATCCATC GTCTCACCGA TCCGGAAGCC GGCGACGCGC TCACCGTCGT GACCGCGCTG
CCGCCGCCGC GCGGCTTCAT CAAGCGGCAG ACCTTCGTCG AGTTCAATCT CCTGGAGTCG
ATCCACGGCG TGGTGATCGA ACTGAAGTCC GACGACGTCA CCGTCGACGC CGCCGCCGAT
GCGGTGGTGC TGACGCGACC GGGCGGGTTG ACGCTGTCGT CGGCCGAGCC GGCTGGGCAG
GTCGGCTCGC CGACCGAGAA GCCGTTCTTC GACATCGCGC AATGGTCGAA GGATCAGGAG
GGCCGTTTCC TCGAGGTCCT CGACGCGAAG GTGAACGCGG CGTCGGCCGC GACCGGCGAC
GACCGGCTGC CGGCGCGGCT CGATCTGGCG CGGTTCTACA TGGCGCGCGG CCTGTATCAG
GAAGCCAAAG GCGTGCTCGA CCTCGCGTTG CTCGGCGTCA AGACCGGGCA GGAGGACACC
GCGACGATGA TCGGCCACGC CGCGGCCAGC GCGCTGATGT CGCGGCCGGA GCAGACGCTG
AAGGACGTCG CGAATCCGGC GATCTCGTCG ACCTATGACG CGCAATTGTG GAAGGGCGTT
GCGCTGGCGC GGCAGGGCAA ATGGCCGGAA GCGCGTGAGA AGCTGAAGAC GGTGCAGTTC
GCGGTCACCG CGCTGCCGCT CGATATTCAG CGCGAGGTGC TCGCCGCGGC GATGCGCGCG
TCGCTCGAAG TGCGCGATTA CTCCGGCGCC GCCAAGATCA GCAGCGACTT CGATCTGGTC
GGAATTCCGG CGCAGTTGAA GCCGCAGCTC GCTTTCATGC GCGGCTGGCT CGACGAGTCG
CTCGGCCGCG ATCAGGAGGC GCTGCGAAAA TACAAGGAGG CGATGGCCTC GCCGGACCGC
CAGGCCGTCA GCGAGGCCAA GTTTCGCGAT ATCGTGCTGC GCTCCAAGCG CGACGAGCTG
ACGCCGGCCG AAGCGCTGCC GGAGCTCGAA CGGTTGTCGG TGACGTGGCG CGGCGACGAC
CTCGAAGTCC GCACCCAGCA ATTGCTGTCG AAGCTCTACG CCAATGCCGG CCGCTACCGC
GACTCGCTGG CGGCGGCGCG GATCGCGACG CAGCTCGCGC CGAACTCCGA ATACGCGCGT
CAGGCGCAGG ACGACAGCCG GGCGCTGTTC TCGCAGATCT TTATCGGCGG CAAGGGCGAC
GACATCCCGC CGATCGAGGC GCTGGCGACG TTCTACGAAT TCCGCGAACT GACGCCGATC
GGCCGTCGCG GCGATGAGAT CATCCGCCGG CTCGCCGATC GGCTGGTCGC TGTCGATCTG
CTCGATCAGG CGAGCGAGCT GTTGCAGTAC CAGGTCGACA AGCGGCTCGA AGGCGCGGCG
CGCGCCCAGG TCGCAGCGCG GCTGGCGATG GTCTATCTGA TGAACCACAA GCCCGACCGC
GCGATCGCCG CGTTGCATTC GTCGCGGATC GCCGACCTCG CCGGCGAAAT ACGTCAGCAG
CGGTTGCTGC TCGAAGCGCG GGCGCAGAGT GACATCGGCC GTCACGATCT CGCGCTCGAC
ATCATCAGTA ACATCGGCGG TCGCGAGGCG ATCCGTCTGC GCTCCGATAT CTACTGGGCG
TCGCGGCGCT GGCGGGAATC CTCCGAGCAG ATCGAATTGT ATCTCGGCGA TCGCTGGCGT
GATTTTACGC CACTGTCGCA GGCCGAAAAG GGCGATGTGA TCCGCGCCGT GGTCGGCTAC
GCGCTGGCCG AGGATGCGCT CGGTCTCGGC CGCTTCCGGG AGAAATTCGC GCCGCTGATG
ACCGACCCGG CCGACCGCGC CGCCTTCGAC ATCGCCAGCA GGCCGGCCGC CGGCGACAGC
GCGGCGTTTG CCGCGATCGC CAAGATGGCG GCGAGCGTCG ACACGCTCGA AGGCTTCCTG
CGCGAGATGA AGCTGCGCTT CCCCGACGCG ACCGCCCGCG CCGCGCCGCC CGGCGCCGAT
ATGAACTCGA CCGGCTCGCT GCCGGAGGTC CCGAAGGTCC GCGTCATCAA GATGACGCGG
TAG
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| Protein sequence | MPALNPARGT MREGGTRPAR QNRVVDRKTR MARMAAAAVW SQALCWRLAR FCLALGLVLT
FALAAWPAAA QAVRGEASFD ATGGYGRLLL KLAEDVESDV TMAGLILVIR FKRPVDIPID
KLADSAPNYI GSARLDPDGS AVRLALVRKL NVNPMAAGER LYIDFLPDNW SGAPPGLPQD
VVKALAERAR LAERALRAQQ ARADVKKRPP IRVRASMQPT FVRYLFEIPN DVQVSSTLTD
KKLTVSFNTG LSFDLADAQL AGAPNVGAIS QRIDGNGSSV DFPLIGGADV RSFREEKNFV
VDVGFQPQDG EPLKRNSSAL TLPEIAKLER KPAAPARGAE NGKADTHGAG DADHATTPET
KPAAKPQAQA APQSAAAPPK AAAAAPAPAG PPPRQAEAAT PSKAAAPPVA APVAAVPASA
APATAGAEAS AAPAASPQPS AGPVVAENPQ APPPAPADAV VAMPAAASSA ARAAEARRST
DGLQLTFTFA TPTPAALFRR GEMIWLVLDN TAPFDLAAIR REGGGIVGDV ARVALPQGQA
VRIRLDRPQL AALSDEDGSG KSWSITLADS GRGASRPLTA VRNIADPARS TVTVALNGLG
QIHRLTDPEA GDALTVVTAL PPPRGFIKRQ TFVEFNLLES IHGVVIELKS DDVTVDAAAD
AVVLTRPGGL TLSSAEPAGQ VGSPTEKPFF DIAQWSKDQE GRFLEVLDAK VNAASAATGD
DRLPARLDLA RFYMARGLYQ EAKGVLDLAL LGVKTGQEDT ATMIGHAAAS ALMSRPEQTL
KDVANPAISS TYDAQLWKGV ALARQGKWPE AREKLKTVQF AVTALPLDIQ REVLAAAMRA
SLEVRDYSGA AKISSDFDLV GIPAQLKPQL AFMRGWLDES LGRDQEALRK YKEAMASPDR
QAVSEAKFRD IVLRSKRDEL TPAEALPELE RLSVTWRGDD LEVRTQQLLS KLYANAGRYR
DSLAAARIAT QLAPNSEYAR QAQDDSRALF SQIFIGGKGD DIPPIEALAT FYEFRELTPI
GRRGDEIIRR LADRLVAVDL LDQASELLQY QVDKRLEGAA RAQVAARLAM VYLMNHKPDR
AIAALHSSRI ADLAGEIRQQ RLLLEARAQS DIGRHDLALD IISNIGGREA IRLRSDIYWA
SRRWRESSEQ IELYLGDRWR DFTPLSQAEK GDVIRAVVGY ALAEDALGLG RFREKFAPLM
TDPADRAAFD IASRPAAGDS AAFAAIAKMA ASVDTLEGFL REMKLRFPDA TARAAPPGAD
MNSTGSLPEV PKVRVIKMTR
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