Gene RPD_1684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1684 
SymbolflgF 
ID4022164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1899223 
End bp1899984 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID637961878 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_568821 
Protein GI91976162 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.081345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATA CGCTTCTGGT CGGCTTGTCG CGGCAGGTCG TGCTCGAACG GCAGATGGAT 
GTCGTCGCGA ACAATCTGGC GAACATCAAC ACCAACGGCT TCAAGGCCGA GCGCTCCGTG
TTCCAGGAAT TCCTGAACAC CGGGGCACAT GAAGACAATT TCCAGGCGCA GGACCGCCGG
GTCAGCTTCG TGCAGGACCG CGCCGCGTAT CACGACTTCG CCTCCGGCCC GATGGAGGAG
ACCAAGAACC CGCTCGACGT CGCGATCGAC GGCTCGGCCT TCCTCGTGGT GCAGACGCCG
CAGGGCGAGC GCTACACCCG CGACGGCAAG CTGTCGATCA ATCCGCAGGG TCAGCTCGTC
AACGCGTCCG GCTATCCGGT GCTCGGCAAT TCCGGCCCGA TCGTGTTTCA ACCGACCGAC
AAGTCGATCA ACATCTCGTC GGACGGCAAT GTCAGCGTGC TGGAAGGCGT CGCCACGATC
GACTCGCTGC GCGGCAAGCT GCGGATGGTG TCGTTCGCCC GGCCGCAAAG CTTGGAGAAG
CAGGGCGGCA ACCTGTTCGC CGCGACCTCC GATCGCGGGG CGCCAGATCC CAAAGCGATC
GTTCGCCAGG GCTACGTCGA GAAGTCGAAC GTCAATTCGG TGCTCGAAAT GACGCGGATG
ATCGAAGTCA CCCGCTCCTA CCAGTCCGTC TCCGCGCTGC TGCAGCAGGA GAGTGATCTG
CAGAAGGCCG CAATCGAGCG GCTTGCCGAC GTTCCGGCGT AA
 
Protein sequence
MQNTLLVGLS RQVVLERQMD VVANNLANIN TNGFKAERSV FQEFLNTGAH EDNFQAQDRR 
VSFVQDRAAY HDFASGPMEE TKNPLDVAID GSAFLVVQTP QGERYTRDGK LSINPQGQLV
NASGYPVLGN SGPIVFQPTD KSINISSDGN VSVLEGVATI DSLRGKLRMV SFARPQSLEK
QGGNLFAATS DRGAPDPKAI VRQGYVEKSN VNSVLEMTRM IEVTRSYQSV SALLQQESDL
QKAAIERLAD VPA