Gene RPD_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1681 
SymbolflgH 
ID4022161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1896545 
End bp1897303 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content65% 
IMG OID637961875 
Productflagellar basal body L-ring protein 
Protein accessionYP_568818 
Protein GI91976159 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0473731 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGT CAGTACCAAC CAACCGTATC GTCCTGATCA CCGCGCTGCT CGCGACGGGC 
GGTCTCGCCG GCGGTTGTTC GTCGATCGAC CGGCTCGCCT CGATCGGTGA AAGGCCGGCG
CTGAGCGCGA TCGAGAATCC GACGACGCAG CCGGGCTACA AGCCGGTGCA GATGCCGATG
CCGAAGCCGG AGGTCGCGTC CTACAACGCC AACTCGCTGT GGCGGAACGG TTCGCGGGCG
TTCTTCCGCG ATCAGCGCGC CGCCAAGGTC GGCGACATCA TGACGGTGAC GGTGAATTTC
ACCGACAAGG CCAACATCGC CAACCAGACT CAGCGCAGCC GCTCCAGTTC GGAAGATTCC
GGCATCACCG ATTTCGCCGG CAGCAAACTT CTGACCGGCA ACGCCGCGCA GGTGCTGCCA
GGCCGGCTGC TCTCCACCGA CTCGACGTCG ACGGCCGACG GCAAGGGATC GGTGCAGCGC
CAGGAAGCGT TGCAGACCAG CGTCGCCGCG GTCGTGACGC AGGTGCTGCC GAACGGCAAT
CTGGTGGTCG AAGGCAAGCA GGAGATCCGC GTCAATTTCG AAGTTCGCGA ACTGATCGTC
GCCGGCATCG TGCGCCCGGA GGACATCCAG AGCGACAACA CCATCGATAG CAGCAAGATC
GCGCAGGCCC GCATCGCCTA TGGCGGCCGC GGCCAGATCA CCGACGTGCA GCAACCGCGC
TACGGCCAGC AGGTGATGGA CGTGCTGCTG CCGTTCTGA
 
Protein sequence
MFKSVPTNRI VLITALLATG GLAGGCSSID RLASIGERPA LSAIENPTTQ PGYKPVQMPM 
PKPEVASYNA NSLWRNGSRA FFRDQRAAKV GDIMTVTVNF TDKANIANQT QRSRSSSEDS
GITDFAGSKL LTGNAAQVLP GRLLSTDSTS TADGKGSVQR QEALQTSVAA VVTQVLPNGN
LVVEGKQEIR VNFEVRELIV AGIVRPEDIQ SDNTIDSSKI AQARIAYGGR GQITDVQQPR
YGQQVMDVLL PF