Gene RPD_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1677 
SymbolflgI 
ID4022157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1893458 
End bp1894579 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID637961871 
Productflagellar basal body P-ring protein 
Protein accessionYP_568814 
Protein GI91976155 
COG category[N] Cell motility 
COG ID[COG1706] Flagellar basal-body P-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0126044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGCT TTTCGCCCAC GCTCCTGAAG CTTGCCGCAG CCGCCCTGTC TGCGCTGCTG 
CTGTCGGGCG TGGCCGCCAG CGCCACCTCG CGGATCAAGG ACCTCGCCAA TATCGAGGGC
GTCCGGCAGA ACCAGCTGAT CGGCTACGGC CTTGTGGTCG GCCTCAACGG CACCGGCGAC
ACCCTCAACA ACATCCCCTT CACCAAGCAG TCGCTGCAGG CGATGCTGGA GCGGATGGGC
GTCAATATCC GCGGCGCCAC GATCCGGACC GGCAACGTCG CCGCGGTGAT GGTCACCGGA
AACCTGCCGG CTTTCGCCAC CCAGGGCACC CGGATGGACG TCACCGTCTC CGCGCTCGGC
GACGCCAAGA ATCTGCAAGG CGGCACCCTG CTGGTCACCC CGCTGCTCGG CGCCGACGGC
AACGTCTACG CGGTGGCGCA GGGTTCGCTG GCGATCGGCG GTTTCCAGGC CGAGGGCGAG
GCCGCCAAGA TCACCCGCGG CGTGCCGACC GTCGGCCGGA TCGCCAACGG CGCCATCATT
GAGCGCGAAA TCGAATTCGC ACTGAACCGG CTGCCGAACG TCCGGCTCGC GCTGCGCAAC
GCCGACTTCA CCACGGCCAA GCGGATCGCC GCCGCGGTCA ACGATTTCCT CGGCACCAAG
AGCGCCGAGC CGATCGATCC CTCGACCGTC CAGCTCTCGA TCCCGGCGGA GTTCAAAGGC
AACGCGGTCG CCTTCCTGAC CGAAATCGAG CAATTGCAGG TCGAGCCGGA CCAGGCCGCC
AAGATCATCA TCGACGAGCG CAGCGGCATC ATCGTGATGG GCCGCGACGT CCGGGTCGCT
ACCGTCGCGG TGGCGCAGGG CAATCTCACC GTGTCGATTT CCGAAAGCCC GCAGGTCAGC
CAGCCCAATC CACTATCGCG CGGCCGCACC ACGGTCACGC CGAATTCCCG GATCGGCGTC
ACCGAGGACG GCAAGAAACT GGCGCTGGTG AAAGACGGCG TGTCGCTGCA GCAGCTCGTC
GACGGCCTCA ACGGCCTCGG CATCGGCCCC CGCGACCTGA TCGGCATTCT GCAGGCGATC
AAGGCCGCCG GCGCCATCGA AGCCGATATC GAGGTGATGT GA
 
Protein sequence
MPSFSPTLLK LAAAALSALL LSGVAASATS RIKDLANIEG VRQNQLIGYG LVVGLNGTGD 
TLNNIPFTKQ SLQAMLERMG VNIRGATIRT GNVAAVMVTG NLPAFATQGT RMDVTVSALG
DAKNLQGGTL LVTPLLGADG NVYAVAQGSL AIGGFQAEGE AAKITRGVPT VGRIANGAII
EREIEFALNR LPNVRLALRN ADFTTAKRIA AAVNDFLGTK SAEPIDPSTV QLSIPAEFKG
NAVAFLTEIE QLQVEPDQAA KIIIDERSGI IVMGRDVRVA TVAVAQGNLT VSISESPQVS
QPNPLSRGRT TVTPNSRIGV TEDGKKLALV KDGVSLQQLV DGLNGLGIGP RDLIGILQAI
KAAGAIEADI EVM