| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1667 |
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| Symbol | |
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| ID | 4022147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 1880370 |
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| End bp | 1882202 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637961862 |
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| Product | hypothetical protein |
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| Protein accession | YP_568805 |
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| Protein GI | 91976146 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1749] Flagellar hook protein FlgE
[COG4786] Flagellar basal body rod protein |
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| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.551124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.12233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATCT TCGGCGCTCT CACCACCTCG GTCGCGGGCC TGCGCGCAAA TTCCTACGCG
CTGGAGAACA TCTCCGGAAA CATCGCGAAC TCGCAGACCA CCGCCTTCAA ACGGGTCGAC
ACCGCATTCC TCGATCTGAT CCCGCAGGCC GGCACCAACG CGCAGGTCGC GGGCTCGGTG
ACTTCCGAAT CGCGGCTCAC CAACACGCTG TCGGGGTCGG TGCAATCGGC CTCGGTGTCG
ACCTACATGG CGATCAACGG CGAGGGCTTC TTCGCGGTGC AGAAGCCCGG CTCGTTCTCC
GACAACAGCC CGGTGTTCAC CGGCGTCAAC AACTACACCC GGCGCGGCGA CTTCTCGCTC
GACAAGAACG GCTATCTGGT CAACGGCGCC GGCTATTATC TGCAGGGCGT GGCGATCGAT
CCGACCACCG GCAACCCGGT CGGCAGCACG CCGACGGTGC TGAAATTCCA GAACGACTTC
CTGCCGTCGC AGGCGACCAC CAAGATCAGC TATCGCGCCA ATCTGGCGAG CTATCCGCTC
ACTACCAAGA ATGACAAGTC GGTCCCGGGG TCGGAGCTGT TGCGCCCTGC GGATTTCACG
TCCAACCCGC AGGTCGCCGG CACCGCACCG CCGCCGTTCG CCGACAACAC CAAGGTCGGC
CTGCAAAAGA ACAGCAAGGC CGGCACGGCG ATCACCGCCG CGACGCTGTT GAAGGGCGCC
GCCGCGACCA ACTCGGCCAG CGCCGACTTC ACCATCACCG ACACCATCAC GGTCGGCACC
GGCGGCTCCG CCAAGACGAT CGCGTTCTAC GATTCCGGCG CCGGCGGCTC GGCCGGCGCG
GCGCCGAACA CCACCTATCT CGATCTCGCA ACGGCCACGG TCGGCAATCT GCTCGGCGCG
ATCGACACCG CGAACGGCAA TGGTGGCACC CCCTCGTCGG TGGCCACCGG CGCGATCACG
CTGCACACCG GCATCGCGGC CGACCTGACG CTGACATCGA CCTCCGCCGG CTTCGCGTCG
CTCGGCCTGA CCAGCCCGGT CAGCGTCGCC CGCCTCGGCG GCGGCAGCGT GGGCACCGGC
CAGGTGACCG GCGCGGAGAA CCAGACCTTC CTCGACGAAT CGATTTCGGG CGGCGCGACC
ACCGCCTATG ACGGCAGCGG CGCGCCGGTG AACGTGCAGT TCCGCTGGGC CAAGATCGAC
TCGGCCGCGC TCGGCGTCGG CCATAACGAC ACCTGGAACC TGTTCTACCA GGTCAATCCA
GGCGCCACCG GCAGCCAGGT CGCCTGGCAG AACGTCAACA CCAATTTCAG CTTCAACTCC
ACCGGCCAGA TGAACCCGGT GATCGGCCAG CTCGCGCTTT CGAACCTCAC GGTGTCCGGC
GTCTCGCTCG GTAACGTCAC GATGTCGTTC GGCACCGGCG GCCTGACCCA GTTCTCCGAC
ACCAACGGCA ACGTCCAGGT CAACCAGCTG CAGCAGGACG GCTACGCCGC CGGGCAATTG
ACCAGCGTCT CGGTCAGCAA CGAGGGACGC GTCGTCGGCG CCTATTCCAA CGGTCGCAAT
ATCGACCTCG CCGAAGTCAG CGTCGCCACC TTCAACGGCG CCAATTTCCT CAAGCGCATC
GACGGCGGTG CGTTCGAAGT GACCAACGAA TCCGGCGAGG CTCTGTACGG CAAGGGCGGC
AGCATCTCGG GCTCGTCGCT GGAATCGTCC AACACCGATA TCGCCGACGA ATTCACCAAG
CTGATCGTCA CCCAGCAGGC CTATTCGGCC AACACCAAGG TCATCACCAC GGCCAACACC
ATGGTGCAGG ATCTGCTCAA CGTGATGCGC TGA
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| Protein sequence | MGIFGALTTS VAGLRANSYA LENISGNIAN SQTTAFKRVD TAFLDLIPQA GTNAQVAGSV
TSESRLTNTL SGSVQSASVS TYMAINGEGF FAVQKPGSFS DNSPVFTGVN NYTRRGDFSL
DKNGYLVNGA GYYLQGVAID PTTGNPVGST PTVLKFQNDF LPSQATTKIS YRANLASYPL
TTKNDKSVPG SELLRPADFT SNPQVAGTAP PPFADNTKVG LQKNSKAGTA ITAATLLKGA
AATNSASADF TITDTITVGT GGSAKTIAFY DSGAGGSAGA APNTTYLDLA TATVGNLLGA
IDTANGNGGT PSSVATGAIT LHTGIAADLT LTSTSAGFAS LGLTSPVSVA RLGGGSVGTG
QVTGAENQTF LDESISGGAT TAYDGSGAPV NVQFRWAKID SAALGVGHND TWNLFYQVNP
GATGSQVAWQ NVNTNFSFNS TGQMNPVIGQ LALSNLTVSG VSLGNVTMSF GTGGLTQFSD
TNGNVQVNQL QQDGYAAGQL TSVSVSNEGR VVGAYSNGRN IDLAEVSVAT FNGANFLKRI
DGGAFEVTNE SGEALYGKGG SISGSSLESS NTDIADEFTK LIVTQQAYSA NTKVITTANT
MVQDLLNVMR
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