| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1661 |
|---|
| Symbol | |
|---|
| ID | 4022141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1870914 |
|---|
| End bp | 1871444 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637961856 |
|---|
| Product | putative phosphohistidine phosphatase, SixA |
|---|
| Protein accession | YP_568799 |
|---|
| Protein GI | 91976140 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2062] Phosphohistidine phosphatase SixA |
|---|
| TIGRFAM ID | [TIGR00249] phosphohistidine phosphatase SixA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0747644 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.647229 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGAC TGATTTTGCT GCGTCACGCC AAGACCGAAA CGGATGCACC CAGCGGCAAG
GACCATGACC GCCGGCTCGA CGATCGCGGC CGGACCGATG CCGCGGCGAT CGCCGAATGG
CTCGCCGAGC ACCGGCTGGT GCCGGACCAG GTTCTGGTCT CGACCGCGAC CCGGACCCGC
CAGACCTGGG ACATTCTCGC CGATCTGTTC CCGACCGGCG CCGAGCCGCA GGTCGAGCAT
CTGCCGGAAT TGTACAGCGC CAGCGCGGCG CAACTGCTGC ATGCGATCCA CGAGGTCTCC
GCCGGCAACA ATCAGCTGAT GCTGGTCGGG CACAATCCGG GCCTTCAGGA ACTCGCGCTC
GGCCTGACCT GCCGCTGCAA TGACAGCGAC CGCAAGCTGT TGTCCGGCAG CATGCCGACC
AGCGCGGTCG CGGTGATCGA CTTCCCGATC GCCGACTGGG CCGACGCCTG CTTCGGCACC
GGCAAGCTGC AGCACTTCGT CAGCCCGAAG ATCCTGCGCG AGGCGAGTTA G
|
|---|
| Protein sequence | MRRLILLRHA KTETDAPSGK DHDRRLDDRG RTDAAAIAEW LAEHRLVPDQ VLVSTATRTR
QTWDILADLF PTGAEPQVEH LPELYSASAA QLLHAIHEVS AGNNQLMLVG HNPGLQELAL
GLTCRCNDSD RKLLSGSMPT SAVAVIDFPI ADWADACFGT GKLQHFVSPK ILREAS
|
|---|
| |