Gene RPD_1660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1660 
Symbol 
ID4022140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1870279 
End bp1870710 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content67% 
IMG OID637961855 
Producthypothetical protein 
Protein accessionYP_568798 
Protein GI91976139 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.113526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.662915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGAT CCATTCTGGT GCCGATCGAT CTCGCCGACA CCGCGCTGGC GCGACCGGCG 
ATCGAGACCG CGGCGACGCT GGCGCGGACT TACGACGGCA CGGTGCGGCT GCTGCACGTG
ATTTCGATCA CCCCGGTGGT GCTTGCCGAA TACGTGCCCG CGGATTTCGA CGCGCAGCAG
CGCCGCGACG CCGAAGCCGC GCTCGCCGAG GTGGCGCAGA ACTCCGGCAT CGAGCCGTCG
CGGCGATCGA CCAAGGTGCG CCAGGGCGGC ATCTATCACG AGATCATCGA GGAGGTCGCG
GCGATCAAGG CCGACCTGAT CGTGATGAGT TCGCACCGCC CGGCGATGCG CAGCTACTTC
CTCGGTTCCA ACGCCGGCCA CGTCGTCCGC TACGCGCCGT GCTCGGTGCT GGTGGTGCGG
GACAACAAGT AG
 
Protein sequence
MFRSILVPID LADTALARPA IETAATLART YDGTVRLLHV ISITPVVLAE YVPADFDAQQ 
RRDAEAALAE VAQNSGIEPS RRSTKVRQGG IYHEIIEEVA AIKADLIVMS SHRPAMRSYF
LGSNAGHVVR YAPCSVLVVR DNK